RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 NBPF11Q86T75 865 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 RILPL2Q969X0 211 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 SHISA4Q96DD7 197 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 DDRGK1Q96HY6 314 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 UNC93B1Q9H1C4 597 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 TAOK2Q9UL54 1235 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 TRIM6-TRIM34B2RNG4 842 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 CCL5P13501 91 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 GNAT2P19087 354 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 ATP2B2Q01814 1243 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 PPARAQ07869 468 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 IRF5Q13568 498 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 FAM47AQ5JRC9 791 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 VCPKMTQ9H867 229 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 FBXO28Q9NVF7 368 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 RLFQ13129 1914 aa15.23■□□□□ 0.03
GPC1-204ENST00000426280 CYP2B6P20813 491 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 AMOTL1Q8IY63 956 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 USP6NLQ92738 828 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 COA7Q96BR5 231 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 NUP88Q99567 741 aaPredicted RBP15.22■□□□□ 0.03
GPC1-204ENST00000426280 TMEM106CQ9BVX2 250 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 KANSL2Q9H9L4 492 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 MKNK2Q9HBH9 465 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 HELLSQ9NRZ9 838 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 RABGAP1Q9Y3P9 1069 aa15.22■□□□□ 0.03
GPC1-204ENST00000426280 GREB1LQ9C091 1923 aaPredicted RBP15.21■□□□□ 0.03
GPC1-204ENST00000426280 INHAP05111 366 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 SDSP20132 328 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 DSG3P32926 999 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 COG2Q14746 738 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 CCL14Q16627 93 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 MORN1Q5T089 497 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 LBX2Q6XYB7 198 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 GPR142Q7Z601 462 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 ATG4CQ96DT6 458 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 NAPBQ9H115 298 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 IL25Q9H293 177 aa15.21■□□□□ 0.03
GPC1-204ENST00000426280 BIN2Q9UBW5 565 aaPredicted RBP15.21■□□□□ 0.03
GPC1-204ENST00000426280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
GPC1-204ENST00000426280 MYH8P13535 1937 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 FGAP02671 866 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
GPC1-204ENST00000426280 MCMDC2Q4G0Z9 681 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
GPC1-204ENST00000426280 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 SLAIN1Q8ND83 568 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 PXYLP1Q8TE99 480 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 TRIB2Q92519 343 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 CEP95Q96GE4 821 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 MOV10L1Q9BXT6 1211 aaKnown RBP15.2■□□□□ 0.02
GPC1-204ENST00000426280 TANGO6Q9C0B7 1094 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 RNF208Q9H0X6 261 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 CLIP2Q9UDT6 1046 aa15.2■□□□□ 0.02
GPC1-204ENST00000426280 RBBP6Q7Z6E9 1792 aaKnown RBP15.19■□□□□ 0.02
GPC1-204ENST00000426280 NMT2O60551 498 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 GSPT1P15170 499 aaKnown RBP15.19■□□□□ 0.02
GPC1-204ENST00000426280 TFAP4Q01664 338 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 PLEKHH3Q7Z736 793 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 ZNF444Q8N0Y2 327 aaPredicted RBP15.19■□□□□ 0.02
GPC1-204ENST00000426280 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 IL17RBQ9NRM6 502 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 FLRT1Q9NZU1 646 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 NYAP2Q9P242 653 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
GPC1-204ENST00000426280 F5H6K3 240 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 RAD21O60216 631 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 FLOT1O75955 427 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 HSPD1P10809 573 aaKnown RBP15.18■□□□□ 0.02
GPC1-204ENST00000426280 KLRC3Q07444 240 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 TMEM132BQ14DG7 1078 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 ALX1Q15699 326 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 RASGRP2Q7LDG7 609 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 NEDD1Q8NHV4 660 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 LPAR1Q92633 364 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 NACAP1Q9BZK3 213 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 MTMR4Q9NYA4 1195 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 HOXC10Q9NYD6 342 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 BRCA2P51587 3418 aa15.18■□□□□ 0.02
GPC1-204ENST00000426280 WDR46O15213 610 aaKnown RBP15.17■□□□□ 0.02
GPC1-204ENST00000426280 NDUFB10O96000 172 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 GJB1P08034 283 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 PTPREP23469 700 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 MAPK4P31152 587 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 HAND2P61296 217 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
GPC1-204ENST00000426280 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
GPC1-204ENST00000426280 REPS2Q8NFH8 660 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 MKL1Q969V6 931 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 NUDT12Q9BQG2 462 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 ANAPC4Q9UJX5 808 aa15.17■□□□□ 0.02
GPC1-204ENST00000426280 FGRP09769 529 aa15.16■□□□□ 0.02
GPC1-204ENST00000426280 GJA8P48165 433 aa15.16■□□□□ 0.02
GPC1-204ENST00000426280 UBXN2AP68543 259 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms