RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 PHF20Q9BVI0 1012 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 TDRD3Q9H7E2 651 aaKnown RBP16.64■□□□□ 0.25
CDK3-201ENST00000425876 SYCE3A1L190 88 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 NFKBIEO00221 500 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 SCG2P13521 617 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
CDK3-201ENST00000425876 DLGAP5Q15398 846 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 FKBP1CQ5VVH2 108 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 JDP2Q8WYK2 163 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 FTOQ9C0B1 505 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK3-201ENST00000425876 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
CDK3-201ENST00000425876 TMOD2Q9NZR1 351 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 DDTLA6NHG4 134 aaPredicted RBP16.63■□□□□ 0.25
CDK3-201ENST00000425876 BTBD18B2RXH4 712 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 CACNB3P54284 484 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 CXCL9Q07325 125 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 STK38Q15208 465 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 CIAPIN1Q6FI81 312 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 TATDN1Q6P1N9 297 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 SH3BP5LQ7L8J4 393 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 SPZ1Q9BXG8 430 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 SH3GLB2Q9NR46 395 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 CLIC4Q9Y696 253 aa16.63■□□□□ 0.25
CDK3-201ENST00000425876 MYH8P13535 1937 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 SPTLC2O15270 562 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 TTLL1O95922 423 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
CDK3-201ENST00000425876 LIG1P18858 919 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 TCP10Q12799 353 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 TNIP1Q15025 636 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 SLC39A14Q15043 492 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 ADALQ6DHV7 355 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 BICD2Q8TD16 824 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 BRMS1Q9HCU9 246 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 BCS1LQ9Y276 419 aa16.62■□□□□ 0.25
CDK3-201ENST00000425876 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
CDK3-201ENST00000425876 PPP6R2O75170 966 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 SNHG28P0DPA3 235 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 KRT2P35908 639 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 ME1P48163 572 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
CDK3-201ENST00000425876 SPDYE2Q495Y8 402 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
CDK3-201ENST00000425876 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 ZBED3Q96IU2 234 aaPredicted RBP16.61■□□□□ 0.25
CDK3-201ENST00000425876 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 PCDHA7Q9UN72 937 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 MORC2Q9Y6X9 1032 aaPredicted RBP16.61■□□□□ 0.25
CDK3-201ENST00000425876 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
CDK3-201ENST00000425876 KLRF2D3W0D1 207 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDK3-201ENST00000425876 RPS12P25398 132 aaKnown RBP16.6■□□□□ 0.25
CDK3-201ENST00000425876 ASPRV1Q53RT3 343 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.6■□□□□ 0.25
CDK3-201ENST00000425876 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
CDK3-201ENST00000425876 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
CDK3-201ENST00000425876 hCG_1642624A0A1W2PR95 340 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 CALML3P27482 149 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 PTPAQ15257 358 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 NPY5RQ15761 445 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 CERKLQ49MI3 558 aaPredicted RBP16.6■□□□□ 0.25
CDK3-201ENST00000425876 TRIM34Q9BYJ4 488 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
CDK3-201ENST00000425876 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
CDK3-201ENST00000425876 CYTH3O43739 400 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 PDHBP11177 359 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 NR5A1Q13285 461 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 SLC35G1Q2M3R5 365 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 GALNT17Q6IS24 598 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 FAM83AQ86UY5 434 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
CDK3-201ENST00000425876 MKL1Q969V6 931 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 CLSTN2Q9H4D0 955 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 KANSL2Q9H9L4 492 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
CDK3-201ENST00000425876 NR1I2O75469 434 aa16.58■□□□□ 0.24
CDK3-201ENST00000425876 TOB1P50616 345 aaPredicted RBP16.58■□□□□ 0.24
CDK3-201ENST00000425876 ZNF280AP59817 542 aaPredicted RBP16.58■□□□□ 0.24
CDK3-201ENST00000425876 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.24
CDK3-201ENST00000425876 TPRNQ4KMQ1 711 aa16.58■□□□□ 0.24
CDK3-201ENST00000425876 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
CDK3-201ENST00000425876 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.24
CDK3-201ENST00000425876 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
CDK3-201ENST00000425876 OXER1Q8TDS5 423 aa16.58■□□□□ 0.24
CDK3-201ENST00000425876 MRPS27Q92552 414 aaKnown RBP16.58■□□□□ 0.24
CDK3-201ENST00000425876 TNFRSF25Q93038 417 aa16.58■□□□□ 0.24
CDK3-201ENST00000425876 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms