RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 PLIN4Q96Q06 1357 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 A0A0G2JMZ2 1700 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 CENPBP07199 599 aaPredicted RBP26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 TSPY3P0CV98 308 aa26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 TSPY8P0CW00 308 aa26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 COL11A1P12107 1806 aaPredicted RBP26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 FAM47AQ5JRC9 791 aa26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 GTF3C2Q8WUA4 911 aaPredicted RBP26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 LPAR1Q92633 364 aa26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 PAGR1Q9BTK6 254 aa26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.52■■□□□ 1.84
PTCHD3P2-201ENST00000424937 MYPNQ86TC9 1320 aa26.51■■□□□ 1.83
PTCHD3P2-201ENST00000424937 PEX10O60683 326 aa26.51■■□□□ 1.83
PTCHD3P2-201ENST00000424937 MORF4L1Q9UBU8 362 aa26.51■■□□□ 1.83
PTCHD3P2-201ENST00000424937 SRRDQ9UH36 339 aa26.51■■□□□ 1.83
PTCHD3P2-201ENST00000424937 IGKV6D-41A0A0C4DH26 115 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 TNPO2O14787 897 aaKnown RBP26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RAD21O60216 631 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 HOXD10P28358 340 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 PRMT2P55345 433 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 HAND2P61296 217 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 SKAP1Q86WV1 359 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 CEP95Q96GE4 821 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 GOPCQ9HD26 462 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 TXNRD2Q9NNW7 524 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 INCENPQ9NQS7 918 aa26.5■■□□□ 1.83
PTCHD3P2-201ENST00000424937 PLXNB2O15031 1838 aa26.49■■□□□ 1.83
PTCHD3P2-201ENST00000424937 TFAP4Q01664 338 aa26.49■■□□□ 1.83
PTCHD3P2-201ENST00000424937 NEDD1Q8NHV4 660 aa26.49■■□□□ 1.83
PTCHD3P2-201ENST00000424937 IL25Q9H293 177 aa26.49■■□□□ 1.83
PTCHD3P2-201ENST00000424937 NYAP2Q9P242 653 aa26.49■■□□□ 1.83
PTCHD3P2-201ENST00000424937 TACC3Q9Y6A5 838 aa26.49■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RAD50Q92878 1312 aa26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 TSPY2A6NKD2 308 aa26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 SPDYE16A6NNV3 312 aaPredicted RBP26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 WDR46O15213 610 aaKnown RBP26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 PRKCZQ05513 592 aa26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 GPRC5AQ8NFJ5 357 aa26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 TOMM22Q9NS69 142 aa26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RBPJLQ9UBG7 517 aa26.48■■□□□ 1.83
PTCHD3P2-201ENST00000424937 CHMLP26374 656 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 ERVK-9P63128 1117 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 ERVK-24P63145 666 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 SLC9C1Q4G0N8 1177 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RAET1EQ8TD07 263 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 DSCC1Q9BVC3 393 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 MTMR4Q9NYA4 1195 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 CLIP2Q9UDT6 1046 aa26.47■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RBBP6Q7Z6E9 1792 aaKnown RBP26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 ORC4O43929 436 aa26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RANBP6O60518 1105 aaKnown RBP26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 TTLL1O95922 423 aa26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RRP12Q5JTH9 1297 aaKnown RBP26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 POTEEQ6S8J3 1075 aa26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 RUFY2Q8WXA3 655 aa26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 COA7Q96BR5 231 aa26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 NBPF3Q9H094 633 aa26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 GABRQQ9UN88 632 aa26.46■■□□□ 1.83
PTCHD3P2-201ENST00000424937 FLOT1O75955 427 aa26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 SOX10P56693 466 aa26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 COG2Q14746 738 aa26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 SAMD1Q6SPF0 538 aaPredicted RBP26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 LBX2Q6XYB7 198 aa26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 TBC1D10CQ8IV04 446 aa26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 LRRC47Q8N1G4 583 aaKnown RBP26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 RABGAP1Q9Y3P9 1069 aa26.45■■□□□ 1.82
PTCHD3P2-201ENST00000424937 CNMDO75829 334 aa26.44■■□□□ 1.82
PTCHD3P2-201ENST00000424937 FGRP09769 529 aa26.44■■□□□ 1.82
PTCHD3P2-201ENST00000424937 FAM83BQ5T0W9 1011 aa26.44■■□□□ 1.82
PTCHD3P2-201ENST00000424937 ARMC5Q96C12 935 aa26.44■■□□□ 1.82
PTCHD3P2-201ENST00000424937 CENPFP49454 3210 aa26.44■■□□□ 1.82
PTCHD3P2-201ENST00000424937 ZNF213O14771 459 aa26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 FLT3LGP49771 235 aa26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 Q3C1V9 767 aa26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 AKNAD1Q5T1N1 836 aa26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 CCAR1Q8IX12 1150 aaKnown RBP26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 SH3TC2Q8TF17 1288 aa26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 STAG1Q8WVM7 1258 aa26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 BTBD7Q9P203 1132 aa26.43■■□□□ 1.82
PTCHD3P2-201ENST00000424937 F5H6K3 240 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 NMT2O60551 498 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 NDUFB10O96000 172 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 DSG3P32926 999 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 KLRC3Q07444 240 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 MFSD6Q6ZSS7 791 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 NBPF11Q86T75 865 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 NUP88Q99567 741 aaPredicted RBP26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 PORCNQ9H237 461 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 HOXC10Q9NYD6 342 aa26.42■■□□□ 1.82
PTCHD3P2-201ENST00000424937 PCP11498 1178 aaKnown RBP26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 MAPK4P31152 587 aa26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 PPP4R3BQ5MIZ7 849 aa26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 MKL1Q969V6 931 aa26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 ATG4CQ96DT6 458 aa26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 RNF41Q9H4P4 317 aaPredicted RBP26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 CWC22Q9HCG8 908 aaKnown RBP26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 FBXO28Q9NVF7 368 aa26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 CTNNA3Q9UI47 895 aa26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 SYNPO2Q9UMS6 1093 aa26.41■■□□□ 1.82
PTCHD3P2-201ENST00000424937 STX8Q9UNK0 236 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms