RNA–Protein interactions for RNA: ENST00000422806.1

NKX1-1-201, Transcript of NK1 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1-201ENST00000422806 ERVK-9P63128 1117 aa34.42■■■■□ 3.1
NKX1-1-201ENST00000422806 ERVK-24P63145 666 aa34.42■■■■□ 3.1
NKX1-1-201ENST00000422806 ATP2B2Q01814 1243 aa34.42■■■■□ 3.1
NKX1-1-201ENST00000422806 UNC93B1Q9H1C4 597 aa34.42■■■■□ 3.1
NKX1-1-201ENST00000422806 ELNP15502 786 aa34.41■■■■□ 3.1
NKX1-1-201ENST00000422806 FXR1P51114 621 aaKnown RBP eCLIP34.41■■■■□ 3.1
NKX1-1-201ENST00000422806 CLEC10AQ8IUN9 316 aa34.41■■■■□ 3.1
NKX1-1-201ENST00000422806 IFNL3Q8IZI9 196 aa34.41■■■■□ 3.1
NKX1-1-201ENST00000422806 KANSL2Q9H9L4 492 aa34.41■■■■□ 3.1
NKX1-1-201ENST00000422806 EPB41L4AQ9HCS5 686 aaPredicted RBP34.41■■■■□ 3.1
NKX1-1-201ENST00000422806 INHAP05111 366 aa34.4■■■■□ 3.1
NKX1-1-201ENST00000422806 Q3C1V9 767 aa34.4■■■■□ 3.1
NKX1-1-201ENST00000422806 CHD1LQ86WJ1 897 aa34.4■■■■□ 3.1
NKX1-1-201ENST00000422806 DPF3Q92784 378 aa34.4■■■■□ 3.1
NKX1-1-201ENST00000422806 CWC22Q9HCG8 908 aaKnown RBP34.4■■■■□ 3.1
NKX1-1-201ENST00000422806 RABGAP1Q9Y3P9 1069 aa34.4■■■■□ 3.1
NKX1-1-201ENST00000422806 SIAH1Q8IUQ4 282 aa34.39■■■■□ 3.1
NKX1-1-201ENST00000422806 TANGO6Q9C0B7 1094 aa34.39■■■■□ 3.1
NKX1-1-201ENST00000422806 ZNF287Q9HBT7 754 aa34.39■■■■□ 3.1
NKX1-1-201ENST00000422806 TMX2Q9Y320 296 aa34.39■■■■□ 3.1
NKX1-1-201ENST00000422806 FARP2O94887 1054 aaPredicted RBP34.38■■■■□ 3.09
NKX1-1-201ENST00000422806 SGPL1O95470 568 aa34.38■■■■□ 3.09
NKX1-1-201ENST00000422806 MAPK4P31152 587 aa34.38■■■■□ 3.09
NKX1-1-201ENST00000422806 LPAR1Q92633 364 aa34.38■■■■□ 3.09
NKX1-1-201ENST00000422806 NAPBQ9H115 298 aa34.38■■■■□ 3.09
NKX1-1-201ENST00000422806 TRIM6-TRIM34B2RNG4 842 aa34.37■■■■□ 3.09
NKX1-1-201ENST00000422806 EEF2P13639 858 aaKnown RBP34.37■■■■□ 3.09
NKX1-1-201ENST00000422806 CCNA1P78396 465 aa34.37■■■■□ 3.09
NKX1-1-201ENST00000422806 NUCB1Q02818 461 aa34.37■■■■□ 3.09
NKX1-1-201ENST00000422806 ZNF444Q8N0Y2 327 aaPredicted RBP34.37■■■■□ 3.09
NKX1-1-201ENST00000422806 HOXC10Q9NYD6 342 aa34.37■■■■□ 3.09
NKX1-1-201ENST00000422806 GJD2Q9UKL4 321 aa34.37■■■■□ 3.09
NKX1-1-201ENST00000422806 COG2Q14746 738 aa34.36■■■■□ 3.09
NKX1-1-201ENST00000422806 SPICE1Q8N0Z3 855 aa34.36■■■■□ 3.09
NKX1-1-201ENST00000422806 VCPKMTQ9H867 229 aa34.36■■■■□ 3.09
NKX1-1-201ENST00000422806 RASA1P20936 1047 aa34.35■■■■□ 3.09
NKX1-1-201ENST00000422806 POTEEQ6S8J3 1075 aa34.35■■■■□ 3.09
NKX1-1-201ENST00000422806 CCDC129Q6ZRS4 1044 aa34.35■■■■□ 3.09
NKX1-1-201ENST00000422806 RILPL2Q969X0 211 aa34.35■■■■□ 3.09
NKX1-1-201ENST00000422806 NUDT12Q9BQG2 462 aa34.35■■■■□ 3.09
NKX1-1-201ENST00000422806 PORCNQ9H237 461 aa34.35■■■■□ 3.09
NKX1-1-201ENST00000422806 SLC3A2P08195 630 aaKnown RBP34.34■■■■□ 3.09
NKX1-1-201ENST00000422806 KIAA1755Q5JYT7 1200 aa34.34■■■■□ 3.09
NKX1-1-201ENST00000422806 PAK6Q9NQU5 681 aaPredicted RBP34.34■■■■□ 3.09
NKX1-1-201ENST00000422806 SPDYE16A6NNV3 312 aaPredicted RBP34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 RAD21O60216 631 aa34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 IRX6P78412 446 aaPredicted RBP34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 LBX2Q6XYB7 198 aa34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 GOPCQ9HD26 462 aa34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 HELLSQ9NRZ9 838 aa34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 ROBO3Q96MS0 1386 aa34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 TRIOBPQ9H2D6 2365 aa34.33■■■■□ 3.09
NKX1-1-201ENST00000422806 CNMDO75829 334 aa34.32■■■■□ 3.08
NKX1-1-201ENST00000422806 CYP2B6P20813 491 aa34.32■■■■□ 3.08
NKX1-1-201ENST00000422806 WDR78Q5VTH9 848 aa34.32■■■■□ 3.08
NKX1-1-201ENST00000422806 PLEKHH3Q7Z736 793 aa34.32■■■■□ 3.08
NKX1-1-201ENST00000422806 SOCS4Q8WXH5 440 aa34.32■■■■□ 3.08
NKX1-1-201ENST00000422806 NR2E3Q9Y5X4 410 aa34.32■■■■□ 3.08
NKX1-1-201ENST00000422806 PRDM1O75626 825 aa34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 PDE4BQ07343 736 aa34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 CHRDL2Q6WN34 429 aa34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 GPR142Q7Z601 462 aa34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 TICAM2Q86XR7 235 aa34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 DEFB118Q96PH6 123 aa34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 GNL3Q9BVP2 549 aaKnown RBP eCLIP34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 BTBD7Q9P203 1132 aa34.31■■■■□ 3.08
NKX1-1-201ENST00000422806 WDR46O15213 610 aaKnown RBP34.3■■■■□ 3.08
NKX1-1-201ENST00000422806 FLOT1O75955 427 aa34.3■■■■□ 3.08
NKX1-1-201ENST00000422806 SAMD1Q6SPF0 538 aaPredicted RBP34.3■■■■□ 3.08
NKX1-1-201ENST00000422806 PLEKHM2Q8IWE5 1019 aa34.3■■■■□ 3.08
NKX1-1-201ENST00000422806 TFRCP02786 760 aaKnown RBP34.29■■■■□ 3.08
NKX1-1-201ENST00000422806 PPARAQ07869 468 aa34.29■■■■□ 3.08
NKX1-1-201ENST00000422806 CRISPLD2Q9H0B8 497 aa34.29■■■■□ 3.08
NKX1-1-201ENST00000422806 HMGCRP04035 888 aa34.28■■■■□ 3.08
NKX1-1-201ENST00000422806 MCMDC2Q4G0Z9 681 aa34.28■■■■□ 3.08
NKX1-1-201ENST00000422806 FAM227BQ96M60 508 aa34.28■■■■□ 3.08
NKX1-1-201ENST00000422806 DSG3P32926 999 aa34.27■■■■□ 3.08
NKX1-1-201ENST00000422806 OSBPL3Q9H4L5 887 aa34.27■■■■□ 3.08
NKX1-1-201ENST00000422806 NYAP2Q9P242 653 aa34.27■■■■□ 3.08
NKX1-1-201ENST00000422806 XRCC5P13010 732 aaKnown RBP34.26■■■■□ 3.08
NKX1-1-201ENST00000422806 MB21D1Q8N884 522 aa34.26■■■■□ 3.08
NKX1-1-201ENST00000422806 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.26■■■■□ 3.08
NKX1-1-201ENST00000422806 IVNS1ABPQ9Y6Y0 642 aa34.26■■■■□ 3.08
NKX1-1-201ENST00000422806 RGS2P41220 211 aa34.25■■■■□ 3.07
NKX1-1-201ENST00000422806 CLIP2Q9UDT6 1046 aa34.25■■■■□ 3.07
NKX1-1-201ENST00000422806 A0A0D9SFI3 127 aa34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 TSPY3P0CV98 308 aa34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 TSPY8P0CW00 308 aa34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 NMIQ13287 307 aaPredicted RBP34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 PLS1Q14651 629 aa34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 MORN1Q5T089 497 aa34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 VPS53Q5VIR6 699 aa34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 TRMT44Q8IYL2 757 aaKnown RBP34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 RANBP2P49792 3224 aaKnown RBP34.24■■■■□ 3.07
NKX1-1-201ENST00000422806 PLXNB2O15031 1838 aa34.23■■■■□ 3.07
NKX1-1-201ENST00000422806 ATG4CQ96DT6 458 aa34.23■■■■□ 3.07
NKX1-1-201ENST00000422806 SPATC1LQ9H0A9 340 aa34.23■■■■□ 3.07
NKX1-1-201ENST00000422806 RBM27Q9P2N5 1060 aaKnown RBP34.23■■■■□ 3.07
NKX1-1-201ENST00000422806 FOXP2O15409 715 aa34.22■■■■□ 3.07
NKX1-1-201ENST00000422806 PTPREP23469 700 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms