RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CATSPERGQ6ZRH7 1159 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 KIAA1211Q6ZU35 1233 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 P2RX7Q99572 595 aaKnown RBP17.42■□□□□ 0.38
CHD1-202ENST00000414220 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 RPAP3Q9H6T3 665 aaPredicted RBP17.42■□□□□ 0.38
CHD1-202ENST00000414220 WDR46O15213 610 aaKnown RBP17.41■□□□□ 0.38
CHD1-202ENST00000414220 ORC4O43929 436 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 TTLL1O95922 423 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 COG2Q14746 738 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
CHD1-202ENST00000414220 GPRC5AQ8NFJ5 357 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 COA7Q96BR5 231 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 CLIP2Q9UDT6 1046 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 SYNPO2Q9UMS6 1093 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
CHD1-202ENST00000414220 TNPO2O14787 897 aaKnown RBP17.4■□□□□ 0.38
CHD1-202ENST00000414220 HAND2P61296 217 aa17.4■□□□□ 0.38
CHD1-202ENST00000414220 CCNA1P78396 465 aa17.4■□□□□ 0.38
CHD1-202ENST00000414220 FAM47AQ5JRC9 791 aa17.4■□□□□ 0.38
CHD1-202ENST00000414220 AKNAD1Q5T1N1 836 aa17.4■□□□□ 0.38
CHD1-202ENST00000414220 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
CHD1-202ENST00000414220 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
CHD1-202ENST00000414220 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
CHD1-202ENST00000414220 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
CHD1-202ENST00000414220 CLEC10AQ8IUN9 316 aa17.39■□□□□ 0.37
CHD1-202ENST00000414220 SIAH1Q8IUQ4 282 aa17.39■□□□□ 0.37
CHD1-202ENST00000414220 ESR2Q92731 530 aa17.39■□□□□ 0.37
CHD1-202ENST00000414220 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.39■□□□□ 0.37
CHD1-202ENST00000414220 MORF4L1Q9UBU8 362 aa17.39■□□□□ 0.37
CHD1-202ENST00000414220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
CHD1-202ENST00000414220 RABGAP1Q9Y3P9 1069 aa17.39■□□□□ 0.37
CHD1-202ENST00000414220 MYH8P13535 1937 aa17.39■□□□□ 0.37
CHD1-202ENST00000414220 CCDC85CA6NKD9 419 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 ECM2O94769 699 aaPredicted RBP17.38■□□□□ 0.37
CHD1-202ENST00000414220 FGRP09769 529 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 RAET1EQ8TD07 263 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 STAG1Q8WVM7 1258 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 MKL1Q969V6 931 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 CEP95Q96GE4 821 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 PAGR1Q9BTK6 254 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 STX8Q9UNK0 236 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 U3KPZ7 1027 aaPredicted RBP17.38■□□□□ 0.37
CHD1-202ENST00000414220 PTPRFP10586 1907 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 PLIN4Q96Q06 1357 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 LOC285556D6RIA3 1793 aa17.38■□□□□ 0.37
CHD1-202ENST00000414220 IGKV6D-41A0A0C4DH26 115 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 F5H6K3 240 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 SGSM2O43147 1006 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 FLOT1O75955 427 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 KLRC3Q07444 240 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 TRDNQ13061 729 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 LBX2Q6XYB7 198 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 MB21D1Q8N884 522 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 KRT23Q9C075 422 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 CNNM2Q9H8M5 875 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 SRRDQ9UH36 339 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
CHD1-202ENST00000414220 MAPK4P31152 587 aa17.36■□□□□ 0.37
CHD1-202ENST00000414220 ERVK-9P63128 1117 aa17.36■□□□□ 0.37
CHD1-202ENST00000414220 ERVK-24P63145 666 aa17.36■□□□□ 0.37
CHD1-202ENST00000414220 IQCA1Q86XH1 822 aa17.36■□□□□ 0.37
CHD1-202ENST00000414220 ARHGAP39Q9C0H5 1083 aa17.36■□□□□ 0.37
CHD1-202ENST00000414220 ISY1Q9ULR0 285 aaKnown RBP17.36■□□□□ 0.37
CHD1-202ENST00000414220 CTDP1Q9Y5B0 961 aaPredicted RBP17.36■□□□□ 0.37
CHD1-202ENST00000414220 CAPN15O75808 1086 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 DSG3P32926 999 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 SLC9C1Q4G0N8 1177 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
CHD1-202ENST00000414220 GMCL1P1Q8NEA9 526 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 TTC14Q96N46 770 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 INCENPQ9NQS7 918 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 TCP11L1Q9NUJ3 509 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 RBPJLQ9UBG7 517 aa17.35■□□□□ 0.37
CHD1-202ENST00000414220 SPDYE16A6NNV3 312 aaPredicted RBP17.34■□□□□ 0.37
CHD1-202ENST00000414220 CDC45O75419 566 aa17.34■□□□□ 0.37
CHD1-202ENST00000414220 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
CHD1-202ENST00000414220 SLFN13Q68D06 897 aa17.34■□□□□ 0.37
CHD1-202ENST00000414220 IVNS1ABPQ9Y6Y0 642 aa17.34■□□□□ 0.37
CHD1-202ENST00000414220 NDUFB10O96000 172 aa17.33■□□□□ 0.36
CHD1-202ENST00000414220 WDR78Q5VTH9 848 aa17.33■□□□□ 0.36
CHD1-202ENST00000414220 TBC1D10CQ8IV04 446 aa17.33■□□□□ 0.36
CHD1-202ENST00000414220 LRRC47Q8N1G4 583 aaKnown RBP17.33■□□□□ 0.36
CHD1-202ENST00000414220 FEM1BQ9UK73 627 aa17.33■□□□□ 0.36
CHD1-202ENST00000414220 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.36
CHD1-202ENST00000414220 FDX1P10109 184 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
CHD1-202ENST00000414220 BMP3P12645 472 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 SLC1A4P43007 532 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 PRPF38AQ8NAV1 312 aaKnown RBP17.32■□□□□ 0.36
CHD1-202ENST00000414220 SLAIN1Q8ND83 568 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 CHURC1Q8WUH1 139 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 SOCS4Q8WXH5 440 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 NUDT12Q9BQG2 462 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms