RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 EGFLAMQ63HQ2 1017 aa7.51□□□□□ -1.21
LSM5-206ENST00000409987 PAOXQ6QHF9 649 aa7.51□□□□□ -1.21
LSM5-206ENST00000409987 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
LSM5-206ENST00000409987 ZNF669Q96BR6 464 aaPredicted RBP7.51□□□□□ -1.21
LSM5-206ENST00000409987 HAUS7Q99871 368 aa7.51□□□□□ -1.21
LSM5-206ENST00000409987 KDM2BQ8NHM5 1336 aa7.51□□□□□ -1.21
LSM5-206ENST00000409987 ENPP3O14638 875 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 LEFTY1O75610 366 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 EOMESO95936 686 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 EPHX1P07099 455 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 SSRP1Q08945 709 aaKnown RBP7.5□□□□□ -1.21
LSM5-206ENST00000409987 DCAF15Q66K64 600 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 CCDC144CPQ8IYA2 1237 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 JMYQ8N9B5 988 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 DUSP23Q9BVJ7 150 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 CNTNAP4Q9C0A0 1308 aa7.5□□□□□ -1.21
LSM5-206ENST00000409987 RNF225M0QZC1 329 aaPredicted RBP7.49□□□□□ -1.21
LSM5-206ENST00000409987 SHOXO15266 292 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
LSM5-206ENST00000409987 SQSTM1Q13501 440 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 C2orf27AQ580R0 203 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 ZNF662Q6ZS27 426 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 CLEC10AQ8IUN9 316 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 GATA6Q92908 595 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 FAM83CQ9BQN1 747 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 MKRN2Q9H000 416 aaKnown RBP7.49□□□□□ -1.21
LSM5-206ENST00000409987 KLHL25Q9H0H3 589 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 EPN3Q9H201 632 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
LSM5-206ENST00000409987 ESYT3A0FGR9 886 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 ANKRD34BA5PLL1 514 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 HSD3B2P26439 372 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 ADMP35318 185 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 ETV3P41162 512 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 RNF4P78317 190 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 HEATR6Q6AI08 1181 aaKnown RBP7.48□□□□□ -1.21
LSM5-206ENST00000409987 ZNF513Q8N8E2 541 aaPredicted RBP7.48□□□□□ -1.21
LSM5-206ENST00000409987 THAP3Q8WTV1 239 aaPredicted RBP7.48□□□□□ -1.21
LSM5-206ENST00000409987 FGD4Q96M96 766 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 FBXL18Q96ME1 805 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 SPATA9Q9BWV2 254 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 ASPNQ9BXN1 380 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 ZNF451Q9Y4E5 1061 aa7.48□□□□□ -1.21
LSM5-206ENST00000409987 HMX2A2RU54 273 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 LRRN2O75325 713 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 AUHQ13825 339 aaKnown RBP7.47□□□□□ -1.21
LSM5-206ENST00000409987 ANKRD39Q53RE8 183 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 FAM214BQ7L5A3 538 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 C7orf61Q8IZ16 206 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 APBA2Q99767 749 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 C7orf69Q9H7B7 122 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 TMEM260Q9NX78 707 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 APEX2Q9UBZ4 518 aa7.47□□□□□ -1.21
LSM5-206ENST00000409987 TPX2Q9ULW0 747 aaKnown RBP7.47□□□□□ -1.21
LSM5-206ENST00000409987 ADCY3O60266 1144 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 FAM153BP0C7A2 387 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 NAT2P11245 290 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 CD247P20963 164 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 SV2CQ496J9 727 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 TP53INP1Q96A56 240 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 RAXQ9Y2V3 346 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 PTCH2Q9Y6C5 1203 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 SBNO2Q9Y2G9 1366 aa7.46□□□□□ -1.22
LSM5-206ENST00000409987 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 CDC45O75419 566 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 GATA4P43694 442 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 GSK3AP49840 483 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 ZAR1Q86SH2 424 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 GIMAP7Q8NHV1 300 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 TBC1D32Q96NH3 1257 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 LGR4Q9BXB1 951 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 GP6Q9HCN6 339 aa7.45□□□□□ -1.22
LSM5-206ENST00000409987 ITGB2P05107 769 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 CYP7A1P22680 504 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 SNW1Q13573 536 aaKnown RBP7.44□□□□□ -1.22
LSM5-206ENST00000409987 PLEKHG4Q58EX7 1191 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 OGFOD3Q6PK18 319 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 PRR23CQ6ZRP0 262 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 LRRC47Q8N1G4 583 aaKnown RBP7.44□□□□□ -1.22
LSM5-206ENST00000409987 ZBTB38Q8NAP3 1195 aaPredicted RBP7.44□□□□□ -1.22
LSM5-206ENST00000409987 APPBP2Q92624 585 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 SGSM3Q96HU1 749 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 Q96M66 194 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
LSM5-206ENST00000409987 PRDM14Q9GZV8 571 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 PRDM5Q9NQX1 630 aaPredicted RBP7.44□□□□□ -1.22
LSM5-206ENST00000409987 ARHGEF4Q9NR80 690 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 WHRNQ9P202 907 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 STOML1Q9UBI4 398 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.44□□□□□ -1.22
LSM5-206ENST00000409987 PCDHB12Q9Y5F1 795 aa7.44□□□□□ -1.22
LSM5-206ENST00000409987 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms