RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 APBA2Q99767 749 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
MCF2L-210ENST00000409954 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 MYH1P12882 1939 aa17.43■□□□□ 0.38
MCF2L-210ENST00000409954 ZFYP08048 801 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-210ENST00000409954 DSG3P32926 999 aa17.43■□□□□ 0.38
MCF2L-210ENST00000409954 FXR1P51114 621 aaKnown RBP eCLIP17.43■□□□□ 0.38
MCF2L-210ENST00000409954 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
MCF2L-210ENST00000409954 EVX2Q03828 476 aa17.43■□□□□ 0.38
MCF2L-210ENST00000409954 WDR78Q5VTH9 848 aa17.43■□□□□ 0.38
MCF2L-210ENST00000409954 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
MCF2L-210ENST00000409954 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
MCF2L-210ENST00000409954 STRBPQ96SI9 672 aaKnown RBP17.43■□□□□ 0.38
MCF2L-210ENST00000409954 MKI67P46013 3256 aaKnown RBP17.43■□□□□ 0.38
MCF2L-210ENST00000409954 CDK5RAP2Q96SN8 1893 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 AKR1B1P15121 316 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 ICA1Q05084 483 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 CCL14Q16627 93 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 SBK1Q52WX2 424 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 SHCBP1Q8NEM2 672 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 C11orf49Q9H6J7 331 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 VCPKMTQ9H867 229 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 SLC5A4Q9NY91 659 aa17.42■□□□□ 0.38
MCF2L-210ENST00000409954 ARPP21Q9UBL0 812 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-210ENST00000409954 RNF113AO15541 343 aaKnown RBP17.41■□□□□ 0.38
MCF2L-210ENST00000409954 GNAT2P19087 354 aa17.41■□□□□ 0.38
MCF2L-210ENST00000409954 GRB14Q14449 540 aa17.41■□□□□ 0.38
MCF2L-210ENST00000409954 LHX8Q68G74 356 aa17.41■□□□□ 0.38
MCF2L-210ENST00000409954 DPP9Q86TI2 863 aa17.41■□□□□ 0.38
MCF2L-210ENST00000409954 APPBP2Q92624 585 aa17.41■□□□□ 0.38
MCF2L-210ENST00000409954 MROH8Q9H579 483 aa17.41■□□□□ 0.38
MCF2L-210ENST00000409954 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
MCF2L-210ENST00000409954 BRCA2P51587 3418 aa17.41■□□□□ 0.38
MCF2L-210ENST00000409954 CYP2D7A0A087X1C5 515 aa17.4■□□□□ 0.38
MCF2L-210ENST00000409954 A0A1W2PPC1 479 aa17.4■□□□□ 0.38
MCF2L-210ENST00000409954 ERC2O15083 957 aa17.4■□□□□ 0.38
MCF2L-210ENST00000409954 WDR46O15213 610 aaKnown RBP17.4■□□□□ 0.38
MCF2L-210ENST00000409954 MSCO60682 206 aa17.4■□□□□ 0.38
MCF2L-210ENST00000409954 FLOT1O75955 427 aa17.4■□□□□ 0.38
MCF2L-210ENST00000409954 DIS3LQ8TF46 1054 aaKnown RBP17.4■□□□□ 0.38
MCF2L-210ENST00000409954 MOV10L1Q9BXT6 1211 aaKnown RBP17.4■□□□□ 0.38
MCF2L-210ENST00000409954 SPATC1LQ9H0A9 340 aa17.4■□□□□ 0.38
MCF2L-210ENST00000409954 ZNF287Q9HBT7 754 aa17.4■□□□□ 0.38
MCF2L-210ENST00000409954 GSG1L2A8MUP6 293 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 CHGBP05060 677 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 EEF2P13639 858 aaKnown RBP17.39■□□□□ 0.37
MCF2L-210ENST00000409954 CCND3P30281 292 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-210ENST00000409954 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-210ENST00000409954 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 ABRAQ8N0Z2 381 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 OSBP2Q969R2 916 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 PRO3102Q9H379 93 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 MKNK2Q9HBH9 465 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 GOPCQ9HD26 462 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 TTC41PQ6P2S7 1318 aa17.39■□□□□ 0.37
MCF2L-210ENST00000409954 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
MCF2L-210ENST00000409954 SLC25A27O95847 323 aa17.38■□□□□ 0.37
MCF2L-210ENST00000409954 ERCC3P19447 782 aa17.38■□□□□ 0.37
MCF2L-210ENST00000409954 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
MCF2L-210ENST00000409954 ADAMTS5Q9UNA0 930 aa17.38■□□□□ 0.37
MCF2L-210ENST00000409954 PLS1Q14651 629 aa17.37■□□□□ 0.37
MCF2L-210ENST00000409954 OLFML2BQ68BL8 750 aa17.37■□□□□ 0.37
MCF2L-210ENST00000409954 ZNF444Q8N0Y2 327 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-210ENST00000409954 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
MCF2L-210ENST00000409954 FLRT1Q9NZU1 646 aa17.37■□□□□ 0.37
MCF2L-210ENST00000409954 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-210ENST00000409954 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
MCF2L-210ENST00000409954 CEP290O15078 2479 aa17.37■□□□□ 0.37
MCF2L-210ENST00000409954 MINDY4BA8MYZ0 360 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 SMIM22K7EJ46 135 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 IGHA2P01877 340 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 APPP05067 770 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 COL6A1P12109 1028 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 FCER1AP12319 257 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 ADORA2AP29274 412 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 CNGA1P29973 690 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 BMP8BP34820 402 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 NCAPG2Q86XI2 1143 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 ATG4CQ96DT6 458 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 NACAP1Q9BZK3 213 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 NYAP2Q9P242 653 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 STAP2Q9UGK3 403 aa17.36■□□□□ 0.37
MCF2L-210ENST00000409954 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
MCF2L-210ENST00000409954 GPAA1O43292 621 aa17.35■□□□□ 0.37
MCF2L-210ENST00000409954 CYP2C19P33261 490 aa17.35■□□□□ 0.37
MCF2L-210ENST00000409954 RASA1P20936 1047 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 COPB2P35606 906 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 STAT3P40763 770 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 TDO2P48775 406 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 C7orf61Q8IZ16 206 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 IFNL3Q8IZI9 196 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 ARRDC4Q8NCT1 418 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 GDF15Q99988 308 aa17.34■□□□□ 0.37
MCF2L-210ENST00000409954 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
MCF2L-210ENST00000409954 F5H6K3 240 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 VWA5AO00534 786 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 COBLO75128 1261 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 SLC3A2P08195 630 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms