RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SEZ6L2Q6UXD5 910 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 TSHZ1Q6ZSZ6 1077 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 DDX42Q86XP3 938 aaKnown RBP eCLIP6.51□□□□□ -1.37
LSM5-205ENST00000409952 WDR75Q8IWA0 830 aaKnown RBP6.51□□□□□ -1.37
LSM5-205ENST00000409952 NIM1KQ8IY84 436 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 C19orf47Q8N9M1 422 aaKnown RBP6.51□□□□□ -1.37
LSM5-205ENST00000409952 GATA6Q92908 595 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 NINJ1Q92982 152 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 TSR2Q969E8 191 aaKnown RBP6.51□□□□□ -1.37
LSM5-205ENST00000409952 FAM126AQ9BYI3 521 aaPredicted RBP6.51□□□□□ -1.37
LSM5-205ENST00000409952 MIR1-1HGQ9H1L0 117 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 FAM105AQ9NUU6 356 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 TSPAN6O43657 245 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 PLIN1O60240 522 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 ALDH1L1O75891 902 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 LIG1P18858 919 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 GNALP38405 381 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 LRP8Q14114 963 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 PPP2R5EQ16537 467 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 NFE2Q16621 373 aaPredicted RBP6.5□□□□□ -1.37
LSM5-205ENST00000409952 MAP9Q49MG5 647 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 CT47A1Q5JQC4 288 aaPredicted RBP6.5□□□□□ -1.37
LSM5-205ENST00000409952 GK5Q6ZS86 529 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 REC114Q7Z4M0 266 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
LSM5-205ENST00000409952 EMILIN2Q9BXX0 1053 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 UBA5Q9GZZ9 404 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
LSM5-205ENST00000409952 FAM95CA0A1B0GW59 222 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 B2RBV5 119 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 CAND2O75155 1236 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 CD97P48960 835 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 CLCQ05315 142 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 PDE3AQ14432 1141 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 TTF1Q15361 905 aaPredicted RBP6.49□□□□□ -1.37
LSM5-205ENST00000409952 C21orf62-AS1Q17RA5 79 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 ZC3H12AQ5D1E8 599 aaKnown RBP6.49□□□□□ -1.37
LSM5-205ENST00000409952 AKAP4Q5JQC9 854 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 RASIP1Q5U651 963 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 C6orf15Q6UXA7 325 aaPredicted RBP6.49□□□□□ -1.37
LSM5-205ENST00000409952 FAM178BQ8IXR5 827 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 SLC26A8Q96RN1 970 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 KCNF1Q9H3M0 494 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 SEMA6CQ9H3T2 930 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 DISC1Q9NRI5 854 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 RAD18Q9NS91 495 aa6.49□□□□□ -1.37
LSM5-205ENST00000409952 A0A087X0B3 334 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 HYAL3O43820 417 aaPredicted RBP6.48□□□□□ -1.37
LSM5-205ENST00000409952 CILPO75339 1184 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 SLFN14P0C7P3 912 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 USP11P51784 963 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 NFKB2Q00653 900 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 ID3Q02535 119 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 FAM50AQ14320 339 aaKnown RBP6.48□□□□□ -1.37
LSM5-205ENST00000409952 PPP2R5AQ15172 486 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 RALBP1Q15311 655 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 LONRF2Q1L5Z9 754 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 ZC3H12BQ5HYM0 836 aaKnown RBP6.48□□□□□ -1.37
LSM5-205ENST00000409952 GRIN3AQ8TCU5 1115 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
LSM5-205ENST00000409952 FANCD2OSQ96PS1 177 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 APBA2Q99767 749 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 ZC3H12CQ9C0D7 883 aaKnown RBP6.48□□□□□ -1.37
LSM5-205ENST00000409952 GOLGA2P5Q9HBQ8 144 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 SAMM50Q9Y512 469 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 PCDHB5Q9Y5E4 795 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 COMMD10Q9Y6G5 202 aa6.48□□□□□ -1.37
LSM5-205ENST00000409952 KIAA1324LA8MWY0 1029 aaPredicted RBP6.47□□□□□ -1.37
LSM5-205ENST00000409952 HMGB1P1B2RPK0 211 aaPredicted RBP6.47□□□□□ -1.37
LSM5-205ENST00000409952 IRS4O14654 1257 aaPredicted RBP6.47□□□□□ -1.37
LSM5-205ENST00000409952 PDE8AO60658 829 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 RFPL3O75679 317 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 BPNT1O95861 308 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 FAM153BP0C7A2 387 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 ASPAP45381 313 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 RING1Q06587 406 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 OS9Q13438 667 aaPredicted RBP6.47□□□□□ -1.37
LSM5-205ENST00000409952 HDAC1Q13547 482 aaPredicted RBP6.47□□□□□ -1.37
LSM5-205ENST00000409952 CPSF6Q16630 551 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSM5-205ENST00000409952 C4orf46Q504U0 113 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 PAOXQ6QHF9 649 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 MPRIPQ6WCQ1 1025 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.47□□□□□ -1.37
LSM5-205ENST00000409952 DYMQ7RTS9 669 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 SHKBP1Q8TBC3 707 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 GPBAR1Q8TDU6 330 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 ATXN3LQ9H3M9 355 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 EHMT1Q9H9B1 1298 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 C1GALT1Q9NS00 363 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 BCCIPQ9P287 314 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSM5-205ENST00000409952 CYP8B1Q9UNU6 501 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 AP4E1Q9UPM8 1137 aa6.47□□□□□ -1.37
LSM5-205ENST00000409952 CCDC163A0A0D9SF12 145 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 A0A1W2PQH9 124 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 MED26O95402 600 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 F13BP05160 661 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms