RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CYP2D6P10635 497 aa17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 SLFNL1Q499Z3 407 aa17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 OSBP2Q969R2 916 aa17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 DYNLL2Q96FJ2 89 aa17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 TXNRD2Q9NNW7 524 aa17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 STAP2Q9UGK3 403 aa17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
NIF3L1-205ENST00000409588 MYCP01106 439 aaPredicted RBP17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 INHAP05111 366 aa17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 ZYXQ15942 572 aaKnown RBP17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 Q3C1V9 767 aa17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 PLEKHH3Q7Z736 793 aa17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 MB21D1Q8N884 522 aa17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 PHF12Q96QT6 1004 aa17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 NAV1Q8NEY1 1877 aa17.39■□□□□ 0.37
NIF3L1-205ENST00000409588 ZSWIM8A7E2V4 1837 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 A0A1W2PRG0 241 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 GPAA1O43292 621 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 STRNO43815 780 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 APPP05067 770 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 ELNP15502 786 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 ICA1Q05084 483 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 U2AF1L4Q8WU68 220 aaKnown RBP17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 PAK6Q9NQU5 681 aaPredicted RBP17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
NIF3L1-205ENST00000409588 MYH7P12883 1935 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 AKR1B1P15121 316 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 RGS2P41220 211 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 GPR142Q7Z601 462 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 SIAH1Q8IUQ4 282 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 SLC44A5Q8NCS7 719 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 USP6NLQ92738 828 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 PAGR1Q9BTK6 254 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 UNC93B1Q9H1C4 597 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 VCPKMTQ9H867 229 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 HMX1Q9NP08 348 aaPredicted RBP17.37■□□□□ 0.37
NIF3L1-205ENST00000409588 BRCA2P51587 3418 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 SLC15A5A6NIM6 579 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 WDR46O15213 610 aaKnown RBP17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 TFRCP02786 760 aaKnown RBP17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 CHGBP05060 677 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 TDO2P48775 406 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 MORN1Q5T089 497 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 IFNL3Q8IZI9 196 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 ZNF444Q8N0Y2 327 aaPredicted RBP17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 ANKLE1Q8NAG6 615 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 SYNPO2Q9UMS6 1093 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 IVNS1ABPQ9Y6Y0 642 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 SALL3Q9BXA9 1300 aa17.36■□□□□ 0.37
NIF3L1-205ENST00000409588 CYP2D7A0A087X1C5 515 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 SPDYE16A6NNV3 312 aaPredicted RBP17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 MINDY4BA8MYZ0 360 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 PDE1AP54750 535 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 PDE4BQ07343 736 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 PPP4R3BQ5MIZ7 849 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 POTEEQ6S8J3 1075 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 SHCBP1Q8NEM2 672 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 TANGO6Q9C0B7 1094 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 CRISPLD2Q9H0B8 497 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 PORCNQ9H237 461 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 NYAP2Q9P242 653 aa17.35■□□□□ 0.37
NIF3L1-205ENST00000409588 MKI67P46013 3256 aaKnown RBP17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 CNMDO75829 334 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 HOXC6P09630 235 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 EEF2P13639 858 aaKnown RBP17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 CYP2B6P20813 491 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 PTPREP23469 700 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 MAP2K5Q13163 448 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 UBE2Q1Q7Z7E8 422 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 ROBO3Q96MS0 1386 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 MROH8Q9H579 483 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 HELLSQ9NRZ9 838 aa17.34■□□□□ 0.37
NIF3L1-205ENST00000409588 ZKSCAN1P17029 563 aaPredicted RBP17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 RASA1P20936 1047 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 MAP3K21Q5TCX8 1036 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 MKL1Q969V6 931 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 SHISA4Q96DD7 197 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 DEFB118Q96PH6 123 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 APBA2Q99767 749 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 SLC5A4Q9NY91 659 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 DOCK3Q8IZD9 2030 aa17.33■□□□□ 0.36
NIF3L1-205ENST00000409588 M0R2C6 588 aa17.32■□□□□ 0.36
NIF3L1-205ENST00000409588 FLOT1O75955 427 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms