RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 MGAMO43451 1857 aa24.59■■□□□ 1.53
C4orf48-201ENST00000409248 ORC4O43929 436 aa24.58■■□□□ 1.53
C4orf48-201ENST00000409248 HERVK_113P62684 666 aa24.58■■□□□ 1.53
C4orf48-201ENST00000409248 PTH1RQ03431 593 aa24.58■■□□□ 1.53
C4orf48-201ENST00000409248 FBXO46Q6PJ61 603 aaPredicted RBP24.58■■□□□ 1.53
C4orf48-201ENST00000409248 ANKRD13CQ8N6S4 541 aa24.58■■□□□ 1.53
C4orf48-201ENST00000409248 NEDD1Q8NHV4 660 aa24.58■■□□□ 1.53
C4orf48-201ENST00000409248 ABHD8Q96I13 439 aa24.58■■□□□ 1.53
C4orf48-201ENST00000409248 RPAP3Q9H6T3 665 aaPredicted RBP24.58■■□□□ 1.53
C4orf48-201ENST00000409248 NYAP2Q9P242 653 aa24.58■■□□□ 1.53
C4orf48-201ENST00000409248 U3KPZ7 1027 aaPredicted RBP24.58■■□□□ 1.53
C4orf48-201ENST00000409248 IGKV6D-41A0A0C4DH26 115 aa24.57■■□□□ 1.52
C4orf48-201ENST00000409248 TSPY2A6NKD2 308 aa24.57■■□□□ 1.52
C4orf48-201ENST00000409248 SIAH1Q8IUQ4 282 aa24.57■■□□□ 1.52
C4orf48-201ENST00000409248 RNF41Q9H4P4 317 aaPredicted RBP24.57■■□□□ 1.52
C4orf48-201ENST00000409248 TOMM22Q9NS69 142 aa24.57■■□□□ 1.52
C4orf48-201ENST00000409248 WDR46O15213 610 aaKnown RBP24.56■■□□□ 1.52
C4orf48-201ENST00000409248 FCGRTP55899 365 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 HAND2P61296 217 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 TFAP4Q01664 338 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 C8orf34Q49A92 452 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 MAP4K1Q92918 833 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 CEP95Q96GE4 821 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 TANGO6Q9C0B7 1094 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 SYNPO2Q9UMS6 1093 aa24.56■■□□□ 1.52
C4orf48-201ENST00000409248 ZNF213O14771 459 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 RANBP6O60518 1105 aaKnown RBP24.55■■□□□ 1.52
C4orf48-201ENST00000409248 TTLL1O95922 423 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 FGRP09769 529 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 PSMC4P43686 418 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 IMMTQ16891 758 aaKnown RBP24.55■■□□□ 1.52
C4orf48-201ENST00000409248 FAM47AQ5JRC9 791 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 CATSPERGQ6ZRH7 1159 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 STAG1Q8WVM7 1258 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 P2RX7Q99572 595 aaKnown RBP24.55■■□□□ 1.52
C4orf48-201ENST00000409248 ARHGAP39Q9C0H5 1083 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 MTMR4Q9NYA4 1195 aa24.55■■□□□ 1.52
C4orf48-201ENST00000409248 FMNL1O95466 1100 aaPredicted RBP24.54■■□□□ 1.52
C4orf48-201ENST00000409248 NT5C2P49902 561 aa24.54■■□□□ 1.52
C4orf48-201ENST00000409248 PRMT2P55345 433 aa24.54■■□□□ 1.52
C4orf48-201ENST00000409248 AKNAD1Q5T1N1 836 aa24.54■■□□□ 1.52
C4orf48-201ENST00000409248 MFSD6Q6ZSS7 791 aa24.54■■□□□ 1.52
C4orf48-201ENST00000409248 SPICE1Q8N0Z3 855 aa24.54■■□□□ 1.52
C4orf48-201ENST00000409248 MORF4L1Q9UBU8 362 aa24.54■■□□□ 1.52
C4orf48-201ENST00000409248 RBM8AQ9Y5S9 174 aaKnown RBP24.54■■□□□ 1.52
C4orf48-201ENST00000409248 RAD21O60216 631 aa24.53■■□□□ 1.52
C4orf48-201ENST00000409248 HOXD10P28358 340 aa24.53■■□□□ 1.52
C4orf48-201ENST00000409248 CAP1Q01518 475 aa24.53■■□□□ 1.52
C4orf48-201ENST00000409248 RRP12Q5JTH9 1297 aaKnown RBP24.53■■□□□ 1.52
C4orf48-201ENST00000409248 TBC1D10CQ8IV04 446 aa24.53■■□□□ 1.52
C4orf48-201ENST00000409248 TRIM47Q96LD4 638 aa24.53■■□□□ 1.52
C4orf48-201ENST00000409248 CLIP2Q9UDT6 1046 aa24.53■■□□□ 1.52
C4orf48-201ENST00000409248 PTPN22Q9Y2R2 807 aa24.53■■□□□ 1.52
C4orf48-201ENST00000409248 A0A0G2JMZ2 1700 aa24.52■■□□□ 1.52
C4orf48-201ENST00000409248 PARP14Q460N5 1801 aa24.52■■□□□ 1.52
C4orf48-201ENST00000409248 EPB41L2O43491 1005 aaKnown RBP24.52■■□□□ 1.52
C4orf48-201ENST00000409248 LBX2Q6XYB7 198 aa24.52■■□□□ 1.52
C4orf48-201ENST00000409248 NBPF3Q9H094 633 aa24.52■■□□□ 1.52
C4orf48-201ENST00000409248 TNPO2O14787 897 aaKnown RBP24.51■■□□□ 1.51
C4orf48-201ENST00000409248 KIAA1755Q5JYT7 1200 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 GPRC5AQ8NFJ5 357 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 MKL1Q969V6 931 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 PAGR1Q9BTK6 254 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 INCENPQ9NQS7 918 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 HPS5Q9UPZ3 1129 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 RABGAP1Q9Y3P9 1069 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 MYPNQ86TC9 1320 aa24.51■■□□□ 1.51
C4orf48-201ENST00000409248 SPDYE16A6NNV3 312 aaPredicted RBP24.5■■□□□ 1.51
C4orf48-201ENST00000409248 FLOT1O75955 427 aa24.5■■□□□ 1.51
C4orf48-201ENST00000409248 ECM2O94769 699 aaPredicted RBP24.5■■□□□ 1.51
C4orf48-201ENST00000409248 COG2Q14746 738 aa24.5■■□□□ 1.51
C4orf48-201ENST00000409248 ESR2Q92731 530 aa24.5■■□□□ 1.51
C4orf48-201ENST00000409248 HOXC10Q9NYD6 342 aa24.5■■□□□ 1.51
C4orf48-201ENST00000409248 SRRDQ9UH36 339 aa24.5■■□□□ 1.51
C4orf48-201ENST00000409248 STX8Q9UNK0 236 aa24.5■■□□□ 1.51
C4orf48-201ENST00000409248 TACC3Q9Y6A5 838 aa24.5■■□□□ 1.51
C4orf48-201ENST00000409248 RLFQ13129 1914 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 CTGFP29279 349 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 ERVK-9P63128 1117 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 ERVK-24P63145 666 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 IFFO2Q5TF58 517 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 RNF20Q5VTR2 975 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 LRRC47Q8N1G4 583 aaKnown RBP24.49■■□□□ 1.51
C4orf48-201ENST00000409248 GMCL1P1Q8NEA9 526 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 TXNRD2Q9NNW7 524 aa24.49■■□□□ 1.51
C4orf48-201ENST00000409248 F5H6K3 240 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 NDUFB10O96000 172 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 NEDD4P46934 1319 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 CCNA1P78396 465 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 KLRC3Q07444 240 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 MB21D1Q8N884 522 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 COA7Q96BR5 231 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 RBPJLQ9UBG7 517 aa24.48■■□□□ 1.51
C4orf48-201ENST00000409248 FAM83BQ5T0W9 1011 aa24.47■■□□□ 1.51
C4orf48-201ENST00000409248 CREB3L3Q68CJ9 461 aa24.47■■□□□ 1.51
C4orf48-201ENST00000409248 CCAR1Q8IX12 1150 aaKnown RBP24.47■■□□□ 1.51
C4orf48-201ENST00000409248 CNNM2Q9H8M5 875 aa24.47■■□□□ 1.51
C4orf48-201ENST00000409248 IL17RBQ9NRM6 502 aa24.47■■□□□ 1.51
C4orf48-201ENST00000409248 TCP11L1Q9NUJ3 509 aa24.47■■□□□ 1.51
C4orf48-201ENST00000409248 PTCH2Q9Y6C5 1203 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms