RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 FOSP01100 380 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-204ENST00000396464 FGAP02671 866 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 ITGB5P18084 799 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 LIG1P18858 919 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 CD53P19397 219 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
GABPB1-204ENST00000396464 POU5F1BQ06416 359 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 PPP2R5AQ15172 486 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 LRRC41Q15345 812 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 PPP4R4Q6NUP7 873 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 NFXL1Q6ZNB6 911 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 PCGF5Q86SE9 256 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 KIAA0825Q8IV33 1275 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 BCL7CQ8WUZ0 217 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-204ENST00000396464 PKNOX2Q96KN3 472 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 ZC3H12CQ9C0D7 883 aaKnown RBP6.37□□□□□ -1.39
GABPB1-204ENST00000396464 KBTBD4Q9NVX7 518 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 PPP1R9AQ9ULJ8 1098 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 STRIP2Q9ULQ0 834 aa6.37□□□□□ -1.39
GABPB1-204ENST00000396464 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 KCNQ2O43526 872 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 RNGTTO60942 597 aaKnown RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 MYL1P05976 194 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 FAM87AP0C7U9 286 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 POU3F3P20264 500 aaPredicted RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 CNGA1P29973 690 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 ZNF157P51786 506 aaPredicted RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 EPHB1P54762 984 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 ID3Q02535 119 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 TTF1Q15361 905 aaPredicted RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 ZRSR2Q15696 482 aaKnown RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 RPS26P11Q5JNZ5 115 aaPredicted RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 CCDC74AQ96AQ1 378 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 OSBPL7Q9BZF2 842 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 DNAJC25Q9H1X3 360 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 GSX1Q9H4S2 264 aaPredicted RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 SSU72Q9NP77 194 aaKnown RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 GINM1Q9NU53 330 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 MAP3K20Q9NYL2 800 aaKnown RBP6.36□□□□□ -1.39
GABPB1-204ENST00000396464 PRKAG3Q9UGI9 489 aa6.36□□□□□ -1.39
GABPB1-204ENST00000396464 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 CFAP69A5D8W1 941 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 NRDCO43847 1150 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 BPNT1O95861 308 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 SCGB1D2O95969 90 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 PPP2R3AQ06190 1150 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 CDK5R2Q13319 367 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.35□□□□□ -1.39
GABPB1-204ENST00000396464 DTHD1Q6ZMT9 781 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 POU5F2Q8N7G0 328 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 NETO1Q8TDF5 533 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 JADE2Q9NQC1 790 aa6.35□□□□□ -1.39
GABPB1-204ENST00000396464 GPN3Q9UHW5 284 aaPredicted RBP6.35□□□□□ -1.39
GABPB1-204ENST00000396464 R3HCC1Q9Y3T6 440 aaKnown RBP6.35□□□□□ -1.39
GABPB1-204ENST00000396464 ZNF500O60304 480 aaPredicted RBP6.34□□□□□ -1.39
GABPB1-204ENST00000396464 C8AP07357 584 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 ATF3P18847 181 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 IFRD2Q12894 506 aaPredicted RBP6.34□□□□□ -1.39
GABPB1-204ENST00000396464 ZNF792Q3KQV3 632 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 DALRD3Q5D0E6 543 aaKnown RBP6.34□□□□□ -1.39
GABPB1-204ENST00000396464 PI16Q6UXB8 463 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 SEZ6L2Q6UXD5 910 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 ZNF574Q6ZN55 896 aaPredicted RBP6.34□□□□□ -1.39
GABPB1-204ENST00000396464 SMYD4Q8IYR2 804 aaPredicted RBP6.34□□□□□ -1.39
GABPB1-204ENST00000396464 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 PPM1EQ8WY54 764 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 CCDC113Q9H0I3 377 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 CCDC86Q9H6F5 360 aaKnown RBP6.34□□□□□ -1.39
GABPB1-204ENST00000396464 ABCB6Q9NP58 842 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 CRIM1Q9NZV1 1036 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 ADAMTS1Q9UHI8 967 aa6.34□□□□□ -1.39
GABPB1-204ENST00000396464 TMPRSS2O15393 492 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 MCCP23508 829 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 SOX9P48436 509 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 C2orf27AQ580R0 203 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 C10orf62Q5T681 223 aaPredicted RBP6.33□□□□□ -1.4
GABPB1-204ENST00000396464 PRPF40BQ6NWY9 871 aaKnown RBP6.33□□□□□ -1.4
GABPB1-204ENST00000396464 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 CASS4Q9NQ75 786 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 SHTN1A0MZ66 631 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
GABPB1-204ENST00000396464 USP17L7P0C7H9 530 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 MCL1Q07820 350 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 BNIP3Q12983 259 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 ZNF280DQ6N043 979 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 C14orf80Q86SX3 495 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 DDX42Q86XP3 938 aaKnown RBP eCLIP6.33□□□□□ -1.4
GABPB1-204ENST00000396464 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
GABPB1-204ENST00000396464 RC3H2Q9HBD1 1191 aaKnown RBP6.33□□□□□ -1.4
GABPB1-204ENST00000396464 KRT82Q9NSB4 513 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 NRBP1Q9UHY1 535 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 CD2APQ9Y5K6 639 aa6.33□□□□□ -1.4
GABPB1-204ENST00000396464 ALG1L2C9J202 215 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 SMAD7O15105 426 aaKnown RBP6.32□□□□□ -1.4
GABPB1-204ENST00000396464 FCGRTP55899 365 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 TCEA2Q15560 299 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 PKN1Q16512 942 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms