RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 ZSCAN10Q96SZ4 725 aaPredicted RBP7.12□□□□□ -1.27
AFP-202ENST00000395792 RSPH9Q9H1X1 276 aaPredicted RBP7.12□□□□□ -1.27
AFP-202ENST00000395792 IQSEC3Q9UPP2 1182 aaPredicted RBP7.12□□□□□ -1.27
AFP-202ENST00000395792 MORC2Q9Y6X9 1032 aaPredicted RBP7.12□□□□□ -1.27
AFP-202ENST00000395792 GOLGA8AA7E2F4 631 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 G3V3G9 751 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 FMNL1O95466 1100 aaPredicted RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 FAM200BP0CF97 657 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 MRE11P49959 708 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 GNAQP50148 359 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 DYNLL1P63167 89 aaKnown RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 CTDSPL2Q05D32 466 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 SSRP1Q08945 709 aaKnown RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 SEC23AQ15436 765 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 DCAF8Q5TAQ9 597 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 CATIPQ7Z7H3 387 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 USP48Q86UV5 1035 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 TRIM22Q8IYM9 498 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 AATFQ9NY61 560 aaKnown RBP eCLIP7.11□□□□□ -1.27
AFP-202ENST00000395792 COL4A3BPQ9Y5P4 624 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 BAZ2AQ9UIF9 1905 aaKnown RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 ECM29Q5VYK3 1845 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 COL2A1P02458 1487 aaPredicted RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 A0A0G2JLW4 131 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 MINDY4BA8MYZ0 360 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 USP17L12C9JPN9 530 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 USP17L21D6R901 530 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 XBP1P17861 261 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 SMARCA1P28370 1054 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 IARSP41252 1262 aaKnown RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 MLLT3P42568 568 aaPredicted RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 TGFB2P61812 414 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 EN1Q05925 392 aaPredicted RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 TRIM29Q14134 588 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 RTN1Q16799 776 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 MFSD14BQ5SR56 506 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 FBXO18Q8NFZ0 1043 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 SDR42E1Q8WUS8 393 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 C7orf43Q8WVR3 580 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 C8orf76Q96K31 380 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 LZTS2Q9BRK4 669 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 LARP6Q9BRS8 491 aaKnown RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 RNF26Q9BY78 433 aaPredicted RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 LRRC2Q9BYS8 371 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 ORC3Q9UBD5 711 aaPredicted RBP7.11□□□□□ -1.27
AFP-202ENST00000395792 TCEAL9Q9UHQ7 104 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 SNED1Q8TER0 1413 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 MYH1P12882 1939 aa7.11□□□□□ -1.27
AFP-202ENST00000395792 ZNF646O15015 1829 aaPredicted RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 JAK2O60674 1132 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 DEXIO95424 95 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 VDRP11473 427 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 CCT2P78371 535 aaKnown RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 ZRSR2Q15696 482 aaKnown RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 IFIT1BQ5T764 474 aaKnown RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 TTC6Q86TZ1 520 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 ZNF513Q8N8E2 541 aaPredicted RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 SFMBT1Q9UHJ3 866 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 TCHHQ07283 1943 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 WTIPA6NIX2 430 aaPredicted RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 KIF5BP33176 963 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 BTDP43251 543 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 NTRK3Q16288 839 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 TSNAXIP1Q2TAA8 658 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 C16orf86Q6ZW13 317 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 ZNF654Q8IZM8 581 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 CCDC102AQ96A19 550 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 DDX27Q96GQ7 796 aaKnown RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 PUF60Q9UHX1 559 aaKnown RBP7.1□□□□□ -1.27
AFP-202ENST00000395792 RCOR1Q9UKL0 485 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 SCINQ9Y6U3 715 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 PLIN4Q96Q06 1357 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 SLX4Q8IY92 1834 aa7.1□□□□□ -1.27
AFP-202ENST00000395792 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
AFP-202ENST00000395792 TNKSO95271 1327 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 S100BP04271 92 aaPredicted RBP7.09□□□□□ -1.27
AFP-202ENST00000395792 FDPSP14324 419 aaKnown RBP7.09□□□□□ -1.27
AFP-202ENST00000395792 NOVP48745 357 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 KIAA2012Q0VF49 1180 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 COL9A3Q14050 684 aaPredicted RBP7.09□□□□□ -1.27
AFP-202ENST00000395792 SAFBQ15424 915 aaKnown RBP eCLIP7.09□□□□□ -1.27
AFP-202ENST00000395792 CCDC93Q567U6 631 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 CCDC183Q5T5S1 534 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 RNF187Q5TA31 235 aaPredicted RBP7.09□□□□□ -1.27
AFP-202ENST00000395792 CHST3Q7LGC8 479 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 NT5DC4Q86YG4 428 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 TEX11Q8IYF3 940 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 ZNF444Q8N0Y2 327 aaPredicted RBP7.09□□□□□ -1.27
AFP-202ENST00000395792 TTC30BQ8N4P2 665 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 FANCBQ8NB91 859 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 GPT2Q8TD30 523 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 TMC2Q8TDI7 906 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 ZDHHC15Q96MV8 337 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 NAP1L4Q99733 375 aaKnown RBP7.09□□□□□ -1.27
AFP-202ENST00000395792 MCM9Q9NXL9 1143 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 USP17L3A6NCW0 530 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 USP17L4A6NCW7 530 aa7.09□□□□□ -1.27
AFP-202ENST00000395792 YEATS4O95619 227 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms