RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 IFT81Q8WYA0 676 aa12.54□□□□□ -0.4
NPC1L1-202ENST00000381160 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
NPC1L1-202ENST00000381160 PLIN2Q99541 437 aa12.54□□□□□ -0.4
NPC1L1-202ENST00000381160 MYO1FO00160 1098 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 PRDM1O75626 825 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 PPARAQ07869 468 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 OR8K1Q8NGG5 319 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 HAUS4Q9H6D7 363 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 SLC52A2Q9HAB3 445 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 MYO1AQ9UBC5 1043 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 MYBL2P10244 700 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 SPAG1Q07617 926 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 MFSD6Q6ZSS7 791 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 KAT2BQ92831 832 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 CYLC1P35663 651 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 TOB1P50616 345 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 KRT83P78385 493 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 WDR93Q6P2C0 686 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-202ENST00000381160 RNF225M0QZC1 329 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 HPDP32754 393 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 PLBD2Q8NHP8 589 aa12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 TMEM87BQ96K49 555 aa12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 ZPR1O75312 459 aa12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.4
NPC1L1-202ENST00000381160 CACNA1FO60840 1977 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 PTPRUQ92729 1446 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 ARHGAP25P42331 645 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 IFIT5Q13325 482 aaKnown RBP12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 LDHAL6AQ6ZMR3 332 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 VIPAS39Q9H9C1 493 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 SRPRBQ9Y5M8 271 aaKnown RBP12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 TTC26A0AVF1 554 aa12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.41
NPC1L1-202ENST00000381160 TECPR2O15040 1411 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 ERCC3P19447 782 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 SCLT1Q96NL6 688 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 MCM7P33993 719 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 NF2P35240 595 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 PAFAH1B1P43034 410 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 FOXO4P98177 505 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 SF3A3Q12874 501 aaKnown RBP eCLIP12.51□□□□□ -0.419e-7■■□□□ 11.7
NPC1L1-202ENST00000381160 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 B4GALNT4Q76KP1 1039 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 SMCR8Q8TEV9 937 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 FAM89AQ96GI7 184 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 SMARCAL1Q9NZC9 954 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 TRIM49BA6NDI0 452 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 ODF2Q5BJF6 829 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 ANKRD13CQ8N6S4 541 aa12.51□□□□□ -0.41
NPC1L1-202ENST00000381160 DEXIO95424 95 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 GUCY2FP51841 1108 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 TRIM14Q14142 442 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 CCDC42Q96M95 316 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 FAM184BQ9ULE4 1060 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 DUSP10Q9Y6W6 482 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 RGPD1P0DJD0 1748 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 ABCC6O95255 1503 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 MTIF2P46199 727 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 SARSP49591 514 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 SUGP1Q8IWZ8 645 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 CEP89Q96ST8 783 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 ARMT1Q9H993 441 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 FRMD3A2A2Y4 597 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 USO1O60763 962 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 PRPF6O94906 941 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 MBD4O95243 580 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 ENOX2Q16206 610 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 TRAPPC11Q7Z392 1133 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 CCDC114Q96M63 670 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 GSDMAQ96QA5 445 aa12.5□□□□□ -0.41
NPC1L1-202ENST00000381160 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms