RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 MIER3Q7Z3K6 550 aa18.85■□□□□ 0.61
COL4A3BP-203ENST00000380494 PCDHA7Q9UN72 937 aa18.85■□□□□ 0.61
COL4A3BP-203ENST00000380494 IFT88Q13099 833 aa18.85■□□□□ 0.61
COL4A3BP-203ENST00000380494 RASIP1Q5U651 963 aa18.85■□□□□ 0.61
COL4A3BP-203ENST00000380494 NOSTRINQ8IVI9 506 aa18.85■□□□□ 0.61
COL4A3BP-203ENST00000380494 PLCH2O75038 1416 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 IRS4O14654 1257 aaPredicted RBP18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 ATP5JP18859 108 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 CCHCR1Q8TD31 782 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 BLZF1Q9H2G9 400 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 RTEL1Q9NZ71 1219 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 PPP1R9AQ9ULJ8 1098 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 TPCN1Q9ULQ1 816 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 ZCRB1Q8TBF4 217 aaKnown RBP18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 SNX29Q8TEQ0 813 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 DBNDD2Q9BQY9 259 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 DNMT1P26358 1616 aaKnown RBP18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 SLC39A6Q13433 755 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 PLS1Q14651 629 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 CERS3Q8IU89 383 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 KIFC2Q96AC6 838 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 RNF14Q9UBS8 474 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 ZMYM6O95789 1325 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 FOXO3O43524 673 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 GTPBP6O43824 516 aaPredicted RBP18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 STMN1P16949 149 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 PDE1CQ14123 709 aaPredicted RBP18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 MMS22LQ6ZRQ5 1243 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 HVCN1Q96D96 273 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 DENND4BO75064 1496 aaPredicted RBP18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
COL4A3BP-203ENST00000380494 RNMTO43148 476 aaKnown RBP18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 IL13P35225 146 aa18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 TXKP42681 527 aa18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 FBXO18Q8NFZ0 1043 aa18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 PPP4R1Q8TF05 950 aa18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 FAF1Q9UNN5 650 aaPredicted RBP18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 IQSEC3Q9UPP2 1182 aaPredicted RBP18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 PZPP20742 1482 aa18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 PLBD2Q8NHP8 589 aa18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 NRBP1Q9UHY1 535 aa18.83■□□□□ 0.61
COL4A3BP-203ENST00000380494 KDM3AQ9Y4C1 1321 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 SPZ1Q9BXG8 430 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 NT5C3AQ9H0P0 336 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 PUM3Q15397 648 aaKnown RBP18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 PHKBQ93100 1093 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 PPP6R2O75170 966 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 HNRNPH2P55795 449 aaKnown RBP18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 BIRC3Q13489 604 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 SLC35F6Q8N357 371 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 XAGE2Q96GT9 111 aa18.83■□□□□ 0.6
COL4A3BP-203ENST00000380494 B4DLN1 442 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 FBXO31Q5XUX0 539 aaPredicted RBP18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 NDUFA8P51970 172 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 COG7P83436 770 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 ZKSCAN8Q15776 578 aaPredicted RBP18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 ICE2Q659A1 982 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 CACTINQ8WUQ7 758 aaKnown RBP18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 TRPM2O94759 1503 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 SYCP2Q9BX26 1530 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 CUL4AQ13619 759 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 SLMAPQ14BN4 828 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 GEN1Q17RS7 908 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 CCDC89Q8N998 374 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 NLRP3Q96P20 1036 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 TUBB6Q9BUF5 446 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 PARD6BQ9BYG5 372 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 ARHGAP42A6NI28 874 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 PFDN1O60925 122 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 IL9RQ01113 521 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 CALCRLQ16602 461 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 HERC4Q5GLZ8 1057 aaPredicted RBP18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 GSDMBQ8TAX9 411 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 MAGEF1Q9HAY2 307 aa18.82■□□□□ 0.6
COL4A3BP-203ENST00000380494 LDHBP07195 334 aaKnown RBP18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 NCBP1Q09161 790 aaKnown RBP18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 PICALMQ13492 652 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 ADCY7P51828 1080 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 RIC8AQ9NPQ8 531 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 INTS9Q9NV88 658 aaKnown RBP18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 DNM3Q9UQ16 869 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 STAT1P42224 750 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 ARMT1Q9H993 441 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 COPB1P53618 953 aaKnown RBP18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 GUCY2DQ02846 1103 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 U2AF1L4Q8WU68 220 aaKnown RBP18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 SUDS3Q9H7L9 328 aaPredicted RBP18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 PALD1Q9ULE6 856 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 USP19O94966 1318 aa18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 EDC4Q6P2E9 1401 aaKnown RBP18.81■□□□□ 0.6
COL4A3BP-203ENST00000380494 PNMA6AP0CW24 399 aaPredicted RBP18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 MAN1A1P33908 653 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 LRRC8CQ8TDW0 803 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 KRT12Q99456 494 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 EYA1Q99502 592 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms