RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 ADD3Q9UEY8 706 aaKnown RBP23.13■■□□□ 1.29
CLN5-201ENST00000377453 ADGRG1Q9Y653 693 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 CICQ96RK0 1608 aaPredicted RBP23.13■■□□□ 1.29
CLN5-201ENST00000377453 TBC1D8O95759 1140 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 TROAPQ12815 778 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 SH3RF1Q7Z6J0 888 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 PPFIBP1Q86W92 1011 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 ARGLU1Q9NWB6 273 aaPredicted RBP23.13■■□□□ 1.29
CLN5-201ENST00000377453 MTMR7Q9Y216 660 aa23.13■■□□□ 1.29
CLN5-201ENST00000377453 BAZ2AQ9UIF9 1905 aaKnown RBP23.13■■□□□ 1.29
CLN5-201ENST00000377453 CC2D1AQ6P1N0 951 aaPredicted RBP23.12■■□□□ 1.29
CLN5-201ENST00000377453 NHSL1Q5SYE7 1610 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 TAF1P21675 1872 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 ERCC5P28715 1186 aaPredicted RBP23.12■■□□□ 1.29
CLN5-201ENST00000377453 ERFEQ4G0M1 354 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 CTR9Q6PD62 1173 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 RASGRP4Q8TDF6 673 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 CDC5LQ99459 802 aaKnown RBP23.12■■□□□ 1.29
CLN5-201ENST00000377453 SRRTQ9BXP5 876 aaKnown RBP23.12■■□□□ 1.29
CLN5-201ENST00000377453 TAB2Q9NYJ8 693 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 RTL9Q8NET4 1388 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 GYPCP04921 128 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 KANK3Q6NY19 840 aa23.12■■□□□ 1.29
CLN5-201ENST00000377453 ARAP2Q8WZ64 1704 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 BCORQ6W2J9 1755 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 PRPF3O43395 683 aaKnown RBP23.11■■□□□ 1.29
CLN5-201ENST00000377453 CCDC175P0C221 793 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 TNFRSF25Q93038 417 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 DISP2A7MBM2 1401 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 ZNF569Q5MCW4 686 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 CDKAL1Q5VV42 579 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 RRAGBQ5VZM2 374 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 RSRC2Q7L4I2 434 aaKnown RBP23.11■■□□□ 1.29
CLN5-201ENST00000377453 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
CLN5-201ENST00000377453 XBP1P17861 261 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 PLIN2Q99541 437 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 GDAQ9Y2T3 454 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 CNTNAP5Q8WYK1 1306 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 PBX1P40424 430 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 ST5P78524 1137 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 TMTC3Q6ZXV5 915 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 EEF2KMTQ96G04 330 aa23.1■■□□□ 1.29
CLN5-201ENST00000377453 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 MFAP3LO75121 409 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 SIK1P57059 783 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 KRT31Q15323 416 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
CLN5-201ENST00000377453 GPKOWQ92917 476 aaPredicted RBP eCLIP23.09■■□□□ 1.29
CLN5-201ENST00000377453 MYH6P13533 1939 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 BCL9LQ86UU0 1499 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 ZBTB22O15209 634 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 PIP4K2BP78356 416 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 NEK11Q8NG66 645 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 ANAPC4Q9UJX5 808 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 TFR2Q9UP52 801 aa23.09■■□□□ 1.29
CLN5-201ENST00000377453 NLRP5P59047 1200 aa23.08■■□□□ 1.29
CLN5-201ENST00000377453 ERVK-24P63145 666 aa23.08■■□□□ 1.29
CLN5-201ENST00000377453 IQCA1Q86XH1 822 aa23.08■■□□□ 1.29
CLN5-201ENST00000377453 NUTM2BA6NNL0 878 aaPredicted RBP23.08■■□□□ 1.28
CLN5-201ENST00000377453 PP2D1A8MPX8 630 aa23.08■■□□□ 1.28
CLN5-201ENST00000377453 NUTM2EB1AL46 878 aaPredicted RBP23.08■■□□□ 1.28
CLN5-201ENST00000377453 OAS2P29728 719 aaKnown RBP23.08■■□□□ 1.28
CLN5-201ENST00000377453 FAM84BQ96KN1 310 aaPredicted RBP23.08■■□□□ 1.28
CLN5-201ENST00000377453 PANX2Q96RD6 677 aa23.08■■□□□ 1.28
CLN5-201ENST00000377453 TRIM49BA6NDI0 452 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 GOLGA6L9A6NEM1 432 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 SLC35F6Q8N357 371 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 TRERF1Q96PN7 1200 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 N4BP3O15049 544 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 E2F4Q16254 413 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 AK7Q96M32 723 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 SUGCTQ9HAC7 445 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 TRIM10Q9UDY6 481 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 ZNF804BA4D1E1 1349 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 FAM205AQ6ZU69 1335 aa23.07■■□□□ 1.28
CLN5-201ENST00000377453 PRDX5P30044 214 aa23.06■■□□□ 1.28
CLN5-201ENST00000377453 ATP2C1P98194 919 aaPredicted RBP23.06■■□□□ 1.28
CLN5-201ENST00000377453 ANKRD18AQ8IVF6 992 aa23.06■■□□□ 1.28
CLN5-201ENST00000377453 GPR161Q8N6U8 529 aaKnown RBP23.06■■□□□ 1.28
CLN5-201ENST00000377453 DUOX1Q9NRD9 1551 aa23.06■■□□□ 1.28
CLN5-201ENST00000377453 KCNQ2O43526 872 aa23.06■■□□□ 1.28
CLN5-201ENST00000377453 GOLGA1Q92805 767 aa23.06■■□□□ 1.28
CLN5-201ENST00000377453 MECOMQ03112 1051 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 WWC2Q6AWC2 1192 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 PDXDC2PQ6P474 469 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 FERMT2Q96AC1 680 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 GSDMAQ96QA5 445 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 MINPP1Q9UNW1 487 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 PLCH1Q4KWH8 1693 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 CHMP4BP1P59074 171 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 PNKPQ96T60 521 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 SLF1Q9BQI6 1058 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 BRMS1Q9HCU9 246 aa23.05■■□□□ 1.28
CLN5-201ENST00000377453 RCAN1P53805 252 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 KIF4BQ2VIQ3 1234 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 PARP10Q53GL7 1025 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 RASGRP2Q7LDG7 609 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 NELFBQ8WX92 580 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 RHOXF2BP0C7M4 288 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 CTCFLQ8NI51 663 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms