RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 USP28Q96RU2 1077 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 MYH7P12883 1935 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 GOLGA6CA6NDK9 693 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 GOLGA6BA6NDN3 693 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 GOLGA6DP0CG33 693 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 SLC5A1P13866 664 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 USP4Q13107 963 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 CDCA2Q69YH5 1023 aaPredicted RBP17.48■□□□□ 0.39
FXN-201ENST00000377270 MMTAG2Q9BU76 263 aaKnown RBP17.48■□□□□ 0.39
FXN-201ENST00000377270 GOLGA6AQ9NYA3 693 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 HPS5Q9UPZ3 1129 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 PARP3Q9Y6F1 533 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 SLIT2O94813 1529 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 GNL2Q13823 731 aaKnown RBP17.48■□□□□ 0.39
FXN-201ENST00000377270 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 SPDL1Q96EA4 605 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 ACBD3Q9H3P7 528 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
FXN-201ENST00000377270 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
FXN-201ENST00000377270 ITPK1Q13572 414 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
FXN-201ENST00000377270 PARD6BQ9BYG5 372 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 A0A087WWV3 80 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 CPLX1O14810 134 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 CAMTA2O94983 1202 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 ILDR1Q86SU0 546 aaPredicted RBP17.47■□□□□ 0.39
FXN-201ENST00000377270 TBC1D10CQ8IV04 446 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 CCAR1Q8IX12 1150 aaKnown RBP17.47■□□□□ 0.39
FXN-201ENST00000377270 AIDAQ96BJ3 306 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 XPO4Q9C0E2 1151 aaKnown RBP17.47■□□□□ 0.39
FXN-201ENST00000377270 TMEM165Q9HC07 324 aa17.47■□□□□ 0.39
FXN-201ENST00000377270 COL22A1Q8NFW1 1626 aaPredicted RBP17.47■□□□□ 0.39
FXN-201ENST00000377270 AHDC1Q5TGY3 1603 aaPredicted RBP17.46■□□□□ 0.39
FXN-201ENST00000377270 TCRBV5S4A2TA0A5A2 114 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
FXN-201ENST00000377270 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
FXN-201ENST00000377270 ATL3Q6DD88 541 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
FXN-201ENST00000377270 TBC1D5Q92609 795 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 PLEKHG4BQ96PX9 1271 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 NIP7Q9Y221 180 aaKnown RBP eCLIP17.46■□□□□ 0.39
FXN-201ENST00000377270 FANCGO15287 622 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 ATL2Q8NHH9 583 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
FXN-201ENST00000377270 STRBPQ96SI9 672 aaKnown RBP17.46■□□□□ 0.39
FXN-201ENST00000377270 ATRNO75882 1429 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 RASGRF1Q13972 1273 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 CCDC152Q4G0S7 254 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 YIPF2Q9BWQ6 316 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
FXN-201ENST00000377270 MYO5AQ9Y4I1 1855 aaKnown RBP17.45■□□□□ 0.38
FXN-201ENST00000377270 WDR19Q8NEZ3 1342 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 RBM47A0AV96 593 aaKnown RBP17.45■□□□□ 0.38
FXN-201ENST00000377270 PHACTR2O75167 634 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 CCT5P48643 541 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 ACTN3Q08043 901 aaPredicted RBP17.45■□□□□ 0.38
FXN-201ENST00000377270 PDIA5Q14554 519 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 KCNB1Q14721 858 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 MAGEB6Q8N7X4 407 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 IFNKQ9P0W0 207 aa17.45■□□□□ 0.38
FXN-201ENST00000377270 RANBP1P43487 201 aa17.44■□□□□ 0.38
FXN-201ENST00000377270 ME1P48163 572 aa17.44■□□□□ 0.38
FXN-201ENST00000377270 MAP3K12Q12852 859 aa17.44■□□□□ 0.38
FXN-201ENST00000377270 CCDC73Q6ZRK6 1079 aa17.44■□□□□ 0.38
FXN-201ENST00000377270 EZH1Q92800 747 aaPredicted RBP17.44■□□□□ 0.38
FXN-201ENST00000377270 SLX1AQ9BQ83 275 aa17.44■□□□□ 0.38
FXN-201ENST00000377270 GOLPH3LQ9H4A5 285 aa17.44■□□□□ 0.38
FXN-201ENST00000377270 WNK3Q9BYP7 1800 aa17.44■□□□□ 0.38
FXN-201ENST00000377270 ZSCAN9O15535 394 aaPredicted RBP17.44■□□□□ 0.38
FXN-201ENST00000377270 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
FXN-201ENST00000377270 RSRC2Q7L4I2 434 aaKnown RBP17.44■□□□□ 0.38
FXN-201ENST00000377270 RBM12BQ8IXT5 1001 aaKnown RBP17.44■□□□□ 0.38
FXN-201ENST00000377270 ANGEL1Q9UNK9 670 aaKnown RBP17.44■□□□□ 0.38
FXN-201ENST00000377270 B4E1Z4 1266 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 EBAG9O00559 213 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 BCAMP50895 628 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 RTN3O95197 1032 aaPredicted RBP17.43■□□□□ 0.38
FXN-201ENST00000377270 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
FXN-201ENST00000377270 TPP2P29144 1249 aaPredicted RBP17.43■□□□□ 0.38
FXN-201ENST00000377270 FNTAP49354 379 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 SPATA21Q7Z572 469 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 RANBP17Q9H2T7 1088 aaKnown RBP17.43■□□□□ 0.38
FXN-201ENST00000377270 FAM204AQ9H8W3 233 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 INCENPQ9NQS7 918 aa17.43■□□□□ 0.38
FXN-201ENST00000377270 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.43■□□□□ 0.38
FXN-201ENST00000377270 KCNQ2O43526 872 aa17.42■□□□□ 0.38
FXN-201ENST00000377270 MBD4O95243 580 aa17.42■□□□□ 0.38
FXN-201ENST00000377270 NTSR2O95665 410 aa17.42■□□□□ 0.38
FXN-201ENST00000377270 THEMIS2Q5TEJ8 643 aa17.42■□□□□ 0.38
FXN-201ENST00000377270 DDX20Q9UHI6 824 aaKnown RBP17.42■□□□□ 0.38
FXN-201ENST00000377270 MRFAP1Q9Y605 127 aa17.42■□□□□ 0.38
FXN-201ENST00000377270 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
FXN-201ENST00000377270 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms