RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 ERVK-24P63145 666 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 MIGA1Q8NAN2 632 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 SHTN1A0MZ66 631 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 MAGEB6Q8N7X4 407 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 CRACR2AQ9BSW2 395 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 GUCA1BQ9UMX6 200 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 CTNND2Q9UQB3 1225 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 SYNRGQ9UMZ2 1314 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 GOLGA6CA6NDK9 693 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 MFAP3LO75121 409 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 GOLGA6DP0CG33 693 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 GSPT2Q8IYD1 628 aaKnown RBP20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 ELOA2Q8IYF1 753 aaPredicted RBP20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 CHP1Q99653 195 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 A1CFQ9NQ94 594 aaKnown RBP20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 GOLGA6AQ9NYA3 693 aa20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 ADD3Q9UEY8 706 aaKnown RBP20.23■□□□□ 0.83
TUBGCP3-202ENST00000375669 AGPSO00116 658 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 PES1O00541 588 aaKnown RBP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 FMNL1O95466 1100 aaPredicted RBP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 IFNL3Q8IZI9 196 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 NUP88Q99567 741 aaPredicted RBP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 NT5DC1Q5TFE4 455 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 GPIHBP1Q8IV16 184 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 SYMPKQ92797 1274 aaKnown RBP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 CAPZA3Q96KX2 299 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 JPH2Q9BR39 696 aaPredicted RBP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 CAPS2Q9BXY5 557 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 EHD4Q9H223 541 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 IQSEC3Q9UPP2 1182 aaPredicted RBP20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
TUBGCP3-202ENST00000375669 ARHGAP25P42331 645 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 TDO2P48775 406 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 ZNF174Q15697 407 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 RTN1Q16799 776 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 GBP6Q6ZN66 633 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 CABS1Q96KC9 395 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 TAB2Q9NYJ8 693 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 HLFQ16534 295 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 TACO1Q9BSH4 297 aaKnown RBP20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 CAPN7Q9Y6W3 813 aa20.21■□□□□ 0.83
TUBGCP3-202ENST00000375669 EIF3HO15372 352 aaKnown RBP eCLIP20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 MRPS25P82663 173 aaKnown RBP20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 TRIM22Q8IYM9 498 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 PAGE5Q96GU1 130 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 N4BP3O15049 544 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 BRD2P25440 801 aaKnown RBP20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 PBX1P40424 430 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 DDR1Q08345 913 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 STAG1Q8WVM7 1258 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 RIPOR2Q9Y4F9 1068 aa20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 SRPRBQ9Y5M8 271 aaKnown RBP20.2■□□□□ 0.82
TUBGCP3-202ENST00000375669 TARSL2A2RTX5 802 aaKnown RBP20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 TCIRG1Q13488 830 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 RILPL1Q5EBL4 403 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 SPATA1Q5VX52 437 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 CNGA4Q8IV77 575 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 CCDC51Q96ER9 411 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 C4AP0C0L4 1744 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 GRIN2DO15399 1336 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 BAZ2BQ9UIF8 2168 aaKnown RBP20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 IFNAR1P17181 557 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 FECHP22830 423 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 MFSD6Q6ZSS7 791 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 TTLL11Q8NHH1 800 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 STRN4Q9NRL3 753 aa20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 GNL3LQ9NVN8 582 aaKnown RBP20.19■□□□□ 0.82
TUBGCP3-202ENST00000375669 GNGT1P63211 74 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 CUL4BQ13620 913 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 TRAPPC11Q7Z392 1133 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 SGMS1Q86VZ5 419 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 TMTC1Q8IUR5 882 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 FAM212AQ96EL1 285 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 SELENOOQ9BVL4 669 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 CARD10Q9BWT7 1032 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 MINDY4BA8MYZ0 360 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 FNTAP49354 379 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 WTAPQ15007 396 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 FKBP15Q5T1M5 1219 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 CRACR2BQ8N4Y2 399 aaPredicted RBP20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 GIMAP7Q8NHV1 300 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 GOLGA6BA6NDN3 693 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 PPP1R3GB7ZBB8 358 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 C21orf2O43822 256 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 SATB1Q01826 763 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 KRT31Q15323 416 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 PROSER2Q86WR7 435 aaPredicted RBP20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 TRIML1Q8N9V2 468 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 MMS19Q96T76 1030 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 TBC1D2BQ9UPU7 963 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 SAMM50Q9Y512 469 aa20.18■□□□□ 0.82
TUBGCP3-202ENST00000375669 ERCC5P28715 1186 aaPredicted RBP20.17■□□□□ 0.82
TUBGCP3-202ENST00000375669 LCORLQ8N3X6 602 aa20.17■□□□□ 0.82
TUBGCP3-202ENST00000375669 ABHD10Q9NUJ1 306 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms