RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MSCO60682 206 aa16.7■□□□□ 0.26
CXCL12-202ENST00000374426 CNGA1P29973 690 aa16.7■□□□□ 0.26
CXCL12-202ENST00000374426 COG2Q14746 738 aa16.7■□□□□ 0.26
CXCL12-202ENST00000374426 KIAA1755Q5JYT7 1200 aa16.7■□□□□ 0.26
CXCL12-202ENST00000374426 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
CXCL12-202ENST00000374426 LPAR1Q92633 364 aa16.7■□□□□ 0.26
CXCL12-202ENST00000374426 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
CXCL12-202ENST00000374426 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
CXCL12-202ENST00000374426 HOXC10Q9NYD6 342 aa16.7■□□□□ 0.26
CXCL12-202ENST00000374426 RLFQ13129 1914 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 APBB1O00213 710 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 CYBAP13498 195 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 ADORA2AP29274 412 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 MDM2Q00987 491 aaPredicted RBP16.69■□□□□ 0.26
CXCL12-202ENST00000374426 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 TANGO6Q9C0B7 1094 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 SPATC1LQ9H0A9 340 aa16.69■□□□□ 0.26
CXCL12-202ENST00000374426 DNM1LO00429 736 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
CXCL12-202ENST00000374426 ERCC3P19447 782 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 SLFNL1Q499Z3 407 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 DPP9Q86TI2 863 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 CLEC10AQ8IUN9 316 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 SIAH1Q8IUQ4 282 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 MIER1Q8N108 512 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 DYNLL2Q96FJ2 89 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 ARMT1Q9H993 441 aa16.68■□□□□ 0.26
CXCL12-202ENST00000374426 A0A0G2JMZ2 1700 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 DLL1O00548 723 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 PRKAB2O43741 272 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 STRNO43815 780 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 COBLO75128 1261 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 ATN1P54259 1190 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-202ENST00000374426 OLFML2BQ68BL8 750 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-202ENST00000374426 SHCBP1Q8NEM2 672 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 MTMR10Q9NXD2 777 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 SWAP70Q9UH65 585 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 ZNF236Q9UL36 1845 aa16.67■□□□□ 0.26
CXCL12-202ENST00000374426 SMIM22K7EJ46 135 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 AKR1B1P15121 316 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 DSG3P32926 999 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 ADD2P35612 726 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 SPICE1Q8N0Z3 855 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 MB21D1Q8N884 522 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 ZBTB40Q9NUA8 1239 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 STXBP5LQ9Y2K9 1186 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 TMX2Q9Y320 296 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
CXCL12-202ENST00000374426 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 HMMRO75330 724 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 FLOT1O75955 427 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 MBD4O95243 580 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 ICA1Q05084 483 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 GJC2Q5T442 439 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-202ENST00000374426 ATG4CQ96DT6 458 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
CXCL12-202ENST00000374426 EYSQ5T1H1 3165 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 CHGBP05060 677 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 MS4A1P11836 297 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 ATP5JP18859 108 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 RTP1P59025 263 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 PLS1Q14651 629 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 C12orf60Q5U649 245 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 ABRAQ8N0Z2 381 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 ARRDC4Q8NCT1 418 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 LBHD1Q9BQE6 289 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-202ENST00000374426 MROH8Q9H579 483 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 ARHGEF10LQ9HCE6 1279 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 COG6Q9Y2V7 657 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 VCANP13611 3396 aa16.64■□□□□ 0.25
CXCL12-202ENST00000374426 BAZ2AQ9UIF9 1905 aaKnown RBP16.63■□□□□ 0.25
CXCL12-202ENST00000374426 SEPT4O43236 478 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 CDK8P49336 464 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 HAUS7Q99871 368 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 SH2D4AQ9H788 454 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 CDH23Q9H251 3354 aa16.63■□□□□ 0.25
CXCL12-202ENST00000374426 USP17L12C9JPN9 530 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 USP17L21D6R901 530 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 WDR46O15213 610 aaKnown RBP16.62■□□□□ 0.25
CXCL12-202ENST00000374426 TMEM132BQ14DG7 1078 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 PRAMEF19Q5SWL8 479 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 C16orf86Q6ZW13 317 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 MAML3Q96JK9 1138 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.25
CXCL12-202ENST00000374426 SLC5A4Q9NY91 659 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 ATP11BQ9Y2G3 1177 aa16.62■□□□□ 0.25
CXCL12-202ENST00000374426 MYH8P13535 1937 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms