RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 RGPD5Q99666 1765 aa20.04■□□□□ 0.8
VPS26A-202ENST00000373382 TRIM49BA6NDI0 452 aa20.04■□□□□ 0.8
VPS26A-202ENST00000373382 PLEKHA8P1O95397 391 aa20.04■□□□□ 0.8
VPS26A-202ENST00000373382 KRT2P35908 639 aa20.04■□□□□ 0.8
VPS26A-202ENST00000373382 MATR3P43243 847 aaKnown RBP eCLIP20.04■□□□□ 0.8
VPS26A-202ENST00000373382 PSD3Q9NYI0 1048 aa20.04■□□□□ 0.8
VPS26A-202ENST00000373382 ASAP1Q9ULH1 1129 aa20.04■□□□□ 0.8
VPS26A-202ENST00000373382 KCNJ18B7U540 433 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 SLC20A2Q08357 652 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 KCNJ12Q14500 433 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 WHAMMP3Q1A5X7 153 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 DNAJC21Q5F1R6 531 aaKnown RBP20.03■□□□□ 0.8
VPS26A-202ENST00000373382 IPO4Q8TEX9 1081 aaKnown RBP20.03■□□□□ 0.8
VPS26A-202ENST00000373382 EPN1Q9Y6I3 576 aaPredicted RBP20.03■□□□□ 0.8
VPS26A-202ENST00000373382 TNKSO95271 1327 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 CTR9Q6PD62 1173 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 ZNF579Q8NAF0 562 aaKnown RBP20.03■□□□□ 0.8
VPS26A-202ENST00000373382 SMARCC1Q92922 1105 aaPredicted RBP20.03■□□□□ 0.8
VPS26A-202ENST00000373382 MMS19Q96T76 1030 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 STK36Q9NRP7 1315 aa20.03■□□□□ 0.8
VPS26A-202ENST00000373382 EIF3CLB5ME19 914 aaKnown RBP20.02■□□□□ 0.8
VPS26A-202ENST00000373382 BCAMP50895 628 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 CTSWP56202 376 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 CDKAL1Q5VV42 579 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 PIK3AP1Q6ZUJ8 805 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 EIF3CQ99613 913 aaKnown RBP20.02■□□□□ 0.8
VPS26A-202ENST00000373382 GNL3LQ9NVN8 582 aaKnown RBP20.02■□□□□ 0.8
VPS26A-202ENST00000373382 ARFGEF2Q9Y6D5 1785 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 MACROD2A1Z1Q3 448 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 ATP1A1P05023 1023 aaKnown RBP20.02■□□□□ 0.8
VPS26A-202ENST00000373382 ARHGAP25P42331 645 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 LRRC31Q6UY01 552 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 FAM71BQ8TC56 605 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 PSMB7Q99436 277 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 CRACR2AQ9BSW2 395 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 JADE2Q9NQC1 790 aa20.02■□□□□ 0.8
VPS26A-202ENST00000373382 TCRBV5S4A2TA0A5A2 114 aa20.02■□□□□ 0.79
VPS26A-202ENST00000373382 USP5P45974 858 aa20.02■□□□□ 0.79
VPS26A-202ENST00000373382 PAK1Q13153 545 aa20.02■□□□□ 0.79
VPS26A-202ENST00000373382 TTC19Q6DKK2 380 aaPredicted RBP20.02■□□□□ 0.79
VPS26A-202ENST00000373382 GSDMAQ96QA5 445 aa20.02■□□□□ 0.79
VPS26A-202ENST00000373382 AATFQ9NY61 560 aaKnown RBP eCLIP20.02■□□□□ 0.79
VPS26A-202ENST00000373382 CSF1RP07333 972 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 AFAP1L1Q8TED9 768 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 SHISA4Q96DD7 197 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 TMOD3Q9NYL9 352 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 ZNF185O15231 689 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 NDUFA10O95299 355 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 PBX1P40424 430 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 TTC38Q5R3I4 469 aa20.01■□□□□ 0.79
VPS26A-202ENST00000373382 TTC26A0AVF1 554 aa20■□□□□ 0.79
VPS26A-202ENST00000373382 UQCRFS1P1P0C7P4 283 aa20■□□□□ 0.79
VPS26A-202ENST00000373382 SPATA20Q8TB22 786 aa20■□□□□ 0.79
VPS26A-202ENST00000373382 BRMS1Q9HCU9 246 aa20■□□□□ 0.79
VPS26A-202ENST00000373382 EIF5P55010 431 aaKnown RBP20■□□□□ 0.79
VPS26A-202ENST00000373382 LUC7L2Q9Y383 392 aaKnown RBP20■□□□□ 0.79
VPS26A-202ENST00000373382 PPARDQ03181 441 aa20■□□□□ 0.79
VPS26A-202ENST00000373382 TTC31Q49AM3 519 aaPredicted RBP20■□□□□ 0.79
VPS26A-202ENST00000373382 IQUBQ8NA54 791 aa20■□□□□ 0.79
VPS26A-202ENST00000373382 CYP7A1P22680 504 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 CYP27A1Q02318 531 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 NLRP10Q86W26 655 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 FBXO3Q9UK99 471 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 SAR1BQ9Y6B6 198 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 NLRP5P59047 1200 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 PUM3Q15397 648 aaKnown RBP19.99■□□□□ 0.79
VPS26A-202ENST00000373382 TCP11X2Q5H9J9 407 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 IFIT1BQ5T764 474 aaKnown RBP19.99■□□□□ 0.79
VPS26A-202ENST00000373382 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.99■□□□□ 0.79
VPS26A-202ENST00000373382 XDHP47989 1333 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 SIPA1L3O60292 1781 aaPredicted RBP19.99■□□□□ 0.79
VPS26A-202ENST00000373382 RIC1Q4ADV7 1423 aa19.99■□□□□ 0.79
VPS26A-202ENST00000373382 ERCC3P19447 782 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 PPARAQ07869 468 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 STIM1Q13586 685 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 ELOA2Q8IYF1 753 aaPredicted RBP19.98■□□□□ 0.79
VPS26A-202ENST00000373382 PCDH11XQ9BZA7 1347 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 PCDH11YQ9BZA8 1340 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 IPO7O95373 1038 aaKnown RBP19.98■□□□□ 0.79
VPS26A-202ENST00000373382 SLC5A1P13866 664 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 LPIN2Q92539 896 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 CCDC51Q96ER9 411 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 DUSP10Q9Y6W6 482 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 GGCXP38435 758 aa19.98■□□□□ 0.79
VPS26A-202ENST00000373382 TRIM21P19474 475 aaKnown RBP19.97■□□□□ 0.79
VPS26A-202ENST00000373382 PRCPP42785 496 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 GTF2A1P52655 376 aaPredicted RBP19.97■□□□□ 0.79
VPS26A-202ENST00000373382 CATIPQ7Z7H3 387 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 MICALL1Q8N3F8 863 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 TRIM47Q96LD4 638 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 POLD4Q9HCU8 107 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 REXO2Q9Y3B8 237 aaKnown RBP19.97■□□□□ 0.79
VPS26A-202ENST00000373382 DNA2P51530 1060 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 C2orf54Q08AI8 447 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 PACS2Q86VP3 889 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 TMTC2Q8N394 836 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 OR8K1Q8NGG5 319 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 ESR2Q92731 530 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 JAKMIP2Q96AA8 810 aa19.97■□□□□ 0.79
VPS26A-202ENST00000373382 TUBB2AQ13885 445 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms