RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 LONRF3Q496Y0 759 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 AOPEPQ8N6M6 819 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 ZNF579Q8NAF0 562 aaKnown RBP20.51■□□□□ 0.87
CTSA-204ENST00000372484 MAD2L2Q9UI95 211 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 MTMR7Q9Y216 660 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 SNED1Q8TER0 1413 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 TPM3P06753 285 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 VEGFAP15692 232 aaPredicted RBP20.5■□□□□ 0.87
CTSA-204ENST00000372484 NLRP12P59046 1061 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 KRBA2Q6ZNG9 492 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 DRC7Q8IY82 874 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 CNNM3Q8NE01 707 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 TNFRSF25Q93038 417 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 PICALMQ13492 652 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 SARM1Q6SZW1 724 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.5■□□□□ 0.87
CTSA-204ENST00000372484 NEDD1Q8NHV4 660 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 MXD3Q9BW11 206 aa20.5■□□□□ 0.87
CTSA-204ENST00000372484 PNOCQ13519 176 aa20.49■□□□□ 0.87
CTSA-204ENST00000372484 C2CD5Q86YS7 1000 aa20.49■□□□□ 0.87
CTSA-204ENST00000372484 QSER1Q2KHR3 1735 aa20.49■□□□□ 0.87
CTSA-204ENST00000372484 NOM1Q5C9Z4 860 aaKnown RBP20.48■□□□□ 0.87
CTSA-204ENST00000372484 BPIFA3Q9BQP9 254 aa20.48■□□□□ 0.87
CTSA-204ENST00000372484 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
CTSA-204ENST00000372484 BMP15O95972 392 aa20.48■□□□□ 0.87
CTSA-204ENST00000372484 CALML3P27482 149 aa20.48■□□□□ 0.87
CTSA-204ENST00000372484 METTL16Q86W50 562 aaKnown RBP20.48■□□□□ 0.87
CTSA-204ENST00000372484 CSRNP2Q9H175 543 aa20.48■□□□□ 0.87
CTSA-204ENST00000372484 MORC2Q9Y6X9 1032 aaPredicted RBP20.48■□□□□ 0.87
CTSA-204ENST00000372484 H0YIN7 160 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 POLR2DO15514 142 aaKnown RBP20.47■□□□□ 0.87
CTSA-204ENST00000372484 SCNN1DP51172 638 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 ISM2Q6H9L7 571 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 GPKOWQ92917 476 aaPredicted RBP eCLIP20.47■□□□□ 0.87
CTSA-204ENST00000372484 SH3GLB2Q9NR46 395 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 HOOK1Q9UJC3 728 aaKnown RBP20.47■□□□□ 0.87
CTSA-204ENST00000372484 RGPD3A6NKT7 1758 aaPredicted RBP20.47■□□□□ 0.87
CTSA-204ENST00000372484 RGPD4Q7Z3J3 1758 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 PIK3AP1Q6ZUJ8 805 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 CEP95Q96GE4 821 aa20.47■□□□□ 0.87
CTSA-204ENST00000372484 PALM3A6NDB9 673 aaPredicted RBP20.46■□□□□ 0.87
CTSA-204ENST00000372484 WNT7AO00755 349 aa20.46■□□□□ 0.87
CTSA-204ENST00000372484 OFD1O75665 1012 aa20.46■□□□□ 0.87
CTSA-204ENST00000372484 ZNF174Q15697 407 aa20.46■□□□□ 0.87
CTSA-204ENST00000372484 ELOA2Q8IYF1 753 aaPredicted RBP20.46■□□□□ 0.87
CTSA-204ENST00000372484 DBNDD1Q9H9R9 158 aa20.46■□□□□ 0.87
CTSA-204ENST00000372484 USP40Q9NVE5 1235 aa20.46■□□□□ 0.87
CTSA-204ENST00000372484 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
CTSA-204ENST00000372484 PODNQ7Z5L7 613 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 LZTS2Q9BRK4 669 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 DDX4Q9NQI0 724 aaKnown RBP20.45■□□□□ 0.86
CTSA-204ENST00000372484 MYH8P13535 1937 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 CYTH3O43739 400 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 GOLGA8HP0CJ92 632 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 CDC25BP30305 580 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 TRAPPC10P48553 1259 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 STYK1Q6J9G0 422 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.45■□□□□ 0.86
CTSA-204ENST00000372484 BLIDQ8IZY5 108 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 TEKT1Q969V4 418 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 FERMT2Q96AC1 680 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 KCNF1Q9H3M0 494 aa20.45■□□□□ 0.86
CTSA-204ENST00000372484 KLRF2D3W0D1 207 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 TOP1P11387 765 aaKnown RBP20.44■□□□□ 0.86
CTSA-204ENST00000372484 PTGS1P23219 599 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 SLC35G1Q2M3R5 365 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 HHIPL2Q6UWX4 724 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 USP49Q70CQ1 688 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 PDILTQ8N807 584 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 MRFAP1L1Q96HT8 127 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 NAP1L5Q96NT1 182 aaPredicted RBP20.44■□□□□ 0.86
CTSA-204ENST00000372484 PCDHA5Q9Y5H7 936 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 SLX4Q8IY92 1834 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 ADAMTS3O15072 1205 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 PARP1P09874 1014 aaKnown RBP20.44■□□□□ 0.86
CTSA-204ENST00000372484 MDM2Q00987 491 aaPredicted RBP20.44■□□□□ 0.86
CTSA-204ENST00000372484 CCDC186Q7Z3E2 898 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 FOXP4Q8IVH2 680 aaPredicted RBP20.44■□□□□ 0.86
CTSA-204ENST00000372484 ANO8Q9HCE9 1232 aaPredicted RBP20.44■□□□□ 0.86
CTSA-204ENST00000372484 SERTAD1Q9UHV2 236 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 NRBP1Q9UHY1 535 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 PCDHA4Q9UN74 947 aa20.44■□□□□ 0.86
CTSA-204ENST00000372484 FOXN1O15353 648 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 GABPAQ06546 454 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 PTGDRQ13258 359 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 POSTNQ15063 836 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 WWC2Q6AWC2 1192 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 RASGRP2Q7LDG7 609 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 HEATR3Q7Z4Q2 680 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 KCNQ5Q9NR82 932 aa20.43■□□□□ 0.86
CTSA-204ENST00000372484 ZNF219Q9P2Y4 722 aaPredicted RBP20.43■□□□□ 0.86
CTSA-204ENST00000372484 SMTNL1A8MU46 457 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 TPM4P67936 248 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 SLC15A2Q16348 729 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 TYW1BQ6NUM6 668 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 CDC42EP5Q6NZY7 148 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 CCDC148Q8NFR7 591 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 CHRNA5P30532 468 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms