RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PDIA4P13667 645 aaKnown RBP12.25□□□□□ -0.45
COL5A1-202ENST00000371820 GNAT2P19087 354 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 SHMT1P34896 483 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 GIMAP6Q6P9H5 292 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 TMEM179Q6ZVK1 233 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 C12orf42Q96LP6 360 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 KIF2CQ99661 725 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 KIAA1683Q9H0B3 1180 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 ASCC2Q9H1I8 757 aaPredicted RBP12.25□□□□□ -0.45
COL5A1-202ENST00000371820 SH2D4AQ9H788 454 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 PAK6Q9NQU5 681 aaPredicted RBP12.25□□□□□ -0.45
COL5A1-202ENST00000371820 MYH8P13535 1937 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 CAPN2P17655 700 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 JAG1P78504 1218 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 C12orf60Q5U649 245 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 FSD1Q9BTV5 496 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
COL5A1-202ENST00000371820 GRPEL1Q9HAV7 217 aa12.24□□□□□ -0.45
COL5A1-202ENST00000371820 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L12C9JPN9 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L21D6R901 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 PRKAB2O43741 272 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 XRCC6P12956 609 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL5A1-202ENST00000371820 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 SLFNL1Q499Z3 407 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-202ENST00000371820 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 ZNF287Q9HBT7 754 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 MORF4L1Q9UBU8 362 aa12.23□□□□□ -0.45
COL5A1-202ENST00000371820 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
COL5A1-202ENST00000371820 BAZ2AQ9UIF9 1905 aaKnown RBP12.22□□□□□ -0.45
COL5A1-202ENST00000371820 GPAA1O43292 621 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 HMGCRP04035 888 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 SDSP20132 328 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 HERVK_113P62684 666 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 SEPT2Q15019 361 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
COL5A1-202ENST00000371820 SBK1Q52WX2 424 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 C16orf86Q6ZW13 317 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
COL5A1-202ENST00000371820 STRBPQ96SI9 672 aaKnown RBP12.22□□□□□ -0.45
COL5A1-202ENST00000371820 NACAP1Q9BZK3 213 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL5A1-202ENST00000371820 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 RBM27Q9P2N5 1060 aaKnown RBP12.22□□□□□ -0.45
COL5A1-202ENST00000371820 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 GJD2Q9UKL4 321 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
COL5A1-202ENST00000371820 ALPK3Q96L96 1907 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 TFRCP02786 760 aaKnown RBP12.21□□□□□ -0.45
COL5A1-202ENST00000371820 CYP2D6P10635 497 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 TDO2P48775 406 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 CDK8P49336 464 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 PDE1AP54750 535 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 CCNA1P78396 465 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 ICA1Q05084 483 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.45
COL5A1-202ENST00000371820 TICAM2Q86XR7 235 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 GPRC5AQ8NFJ5 357 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 LPAR1Q92633 364 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 OSBP2Q969R2 916 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 EVI5LQ96CN4 794 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 IL17RAQ96F46 866 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
COL5A1-202ENST00000371820 INTS4Q96HW7 963 aaKnown RBP12.21□□□□□ -0.45
COL5A1-202ENST00000371820 P2RX7Q99572 595 aaKnown RBP12.21□□□□□ -0.45
COL5A1-202ENST00000371820 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 CHGBP05060 677 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 APPP05067 770 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
COL5A1-202ENST00000371820 GSPT1P15170 499 aaKnown RBP12.2□□□□□ -0.46
COL5A1-202ENST00000371820 VCAM1P19320 739 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 MAPK4P31152 587 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 GUCY1A2P33402 732 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 CLCN1P35523 988 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 SOCS4Q8WXH5 440 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 TRIB2Q92519 343 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
COL5A1-202ENST00000371820 RABGAP1Q9Y3P9 1069 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms