RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PLIN2Q99541 437 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 KDM2BQ8NHM5 1336 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 TADA3O75528 432 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 PMS1P54277 932 aaKnown RBP16.75■□□□□ 0.27
COL5A1-201ENST00000371817 BIRC3Q13489 604 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 CABP5Q9NP86 173 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 GRAMD1BQ3KR37 738 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 CCDC117Q8IWD4 279 aaPredicted RBP16.75■□□□□ 0.27
COL5A1-201ENST00000371817 hCG_2014768A0A024R1R8 64 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 LMBRD1Q9NUN5 540 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 SLC4A7Q9Y6M7 1214 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 TMCO5AQ8N6Q1 288 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 OR8K1Q8NGG5 319 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 PHLPP2Q6ZVD8 1323 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL5A1-201ENST00000371817 COPG1Q9Y678 874 aaKnown RBP16.75■□□□□ 0.27
COL5A1-201ENST00000371817 IL16Q14005 1332 aa16.75■□□□□ 0.27
COL5A1-201ENST00000371817 GSTO1P78417 241 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 USTQ9Y2C2 406 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 SMTNP53814 917 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 NELFBQ8WX92 580 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 ARHGAP45Q92619 1136 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 KRT82Q9NSB4 513 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 DKC1O60832 514 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL5A1-201ENST00000371817 RPGRQ92834 1020 aaKnown RBP16.74■□□□□ 0.27
COL5A1-201ENST00000371817 DESI2Q9BSY9 194 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 SCYL1Q96KG9 808 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 MAPK13O15264 365 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 TMTC4Q5T4D3 741 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 MKL2Q9ULH7 1088 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 S100BP04271 92 aaPredicted RBP16.74■□□□□ 0.27
COL5A1-201ENST00000371817 RRAGAQ7L523 313 aa16.74■□□□□ 0.27
COL5A1-201ENST00000371817 ALS2CLQ60I27 953 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 CCDC15Q0P6D6 951 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 SYCE1LA8MT33 242 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
COL5A1-201ENST00000371817 UQCRFS1P1P0C7P4 283 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 GNAT2P19087 354 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 TMED10P49755 219 aaKnown RBP16.73■□□□□ 0.27
COL5A1-201ENST00000371817 LDHAL6AQ6ZMR3 332 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
COL5A1-201ENST00000371817 PPP1R1BQ9UD71 204 aaPredicted RBP16.73■□□□□ 0.27
COL5A1-201ENST00000371817 SPAG7O75391 227 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 KSR1Q8IVT5 923 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 SLC4A4Q9Y6R1 1079 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 KRT4P19013 534 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 ARHGAP44Q17R89 818 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 BBOF1Q8ND07 529 aa16.73■□□□□ 0.27
COL5A1-201ENST00000371817 DDX28Q9NUL7 540 aaKnown RBP16.73■□□□□ 0.27
COL5A1-201ENST00000371817 DAPK1P53355 1430 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 IFNB1P01574 187 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 STRN3Q13033 797 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 PSMD2Q13200 908 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 HNRNPCL2B2RXH8 293 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 ATP5HO75947 161 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 GNA14O95837 355 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 TRMT10CQ7L0Y3 403 aaKnown RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 FBXO2Q9UK22 296 aaPredicted RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 ART3Q13508 389 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 FLOT2Q14254 428 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 TAB2Q9NYJ8 693 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 ZPR1O75312 459 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 TEKT2Q9UIF3 430 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 DAB2P98082 770 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 TMEM259Q4ZIN3 620 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 RALGAPBQ86X10 1494 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 WBP4O75554 376 aaKnown RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 NMIQ13287 307 aaPredicted RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 DCTN3O75935 186 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 SEC31AO94979 1220 aaKnown RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 INHBAP08476 426 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 ATF2P15336 505 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 LRMPQ12912 555 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 RNF34Q969K3 372 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 CDC5LQ99459 802 aaKnown RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 POLE3Q9NRF9 147 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 MYO1AQ9UBC5 1043 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 CDC23Q9UJX2 597 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 TRPC5Q9UL62 973 aaPredicted RBP16.72■□□□□ 0.27
COL5A1-201ENST00000371817 CAPN11Q9UMQ6 739 aa16.72■□□□□ 0.27
COL5A1-201ENST00000371817 CCNT1O60563 726 aaKnown RBP16.71■□□□□ 0.27
COL5A1-201ENST00000371817 APOA1P02647 267 aa16.71■□□□□ 0.27
COL5A1-201ENST00000371817 NR1D1P20393 614 aa16.71■□□□□ 0.27
COL5A1-201ENST00000371817 PSMC1P62191 440 aaKnown RBP16.71■□□□□ 0.27
COL5A1-201ENST00000371817 PLCB4Q15147 1175 aa16.71■□□□□ 0.27
COL5A1-201ENST00000371817 RBM26Q5T8P6 1007 aaKnown RBP16.71■□□□□ 0.27
COL5A1-201ENST00000371817 CASP2P42575 452 aa16.71■□□□□ 0.27
COL5A1-201ENST00000371817 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms