RNA–Protein interactions for RNA: ENST00000367979.6

NR1I3-201, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-201ENST00000367979 USP6NLQ92738 828 aa15.38■□□□□ 0.05
NR1I3-201ENST00000367979 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.38■□□□□ 0.05
NR1I3-201ENST00000367979 RABGAP1Q9Y3P9 1069 aa15.38■□□□□ 0.05
NR1I3-201ENST00000367979 ALPK3Q96L96 1907 aa15.38■□□□□ 0.05
NR1I3-201ENST00000367979 FOXP2O15409 715 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 PRDM1O75626 825 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
NR1I3-201ENST00000367979 SGPL1O95470 568 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 MAPK4P31152 587 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 WDR78Q5VTH9 848 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 PLEKHH3Q7Z736 793 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 GTF3C2Q8WUA4 911 aaPredicted RBP15.37■□□□□ 0.05
NR1I3-201ENST00000367979 ATG4CQ96DT6 458 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 VCPKMTQ9H867 229 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 FLRT1Q9NZU1 646 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 TMX2Q9Y320 296 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 FRMPD3Q5JV73 1810 aa15.37■□□□□ 0.05
NR1I3-201ENST00000367979 ERC2O15083 957 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-201ENST00000367979 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-201ENST00000367979 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
NR1I3-201ENST00000367979 TDO2P48775 406 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 HDAC1Q13547 482 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-201ENST00000367979 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 ZMYM1Q5SVZ6 1142 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 SOCS4Q8WXH5 440 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 ARHGEF10LQ9HCE6 1279 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 FBXO28Q9NVF7 368 aa15.36■□□□□ 0.05
NR1I3-201ENST00000367979 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 APPP05067 770 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
NR1I3-201ENST00000367979 IFNL3Q8IZI9 196 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 CCDC17Q96LX7 622 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
NR1I3-201ENST00000367979 APBA2Q99767 749 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
NR1I3-201ENST00000367979 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
NR1I3-201ENST00000367979 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 ZNF236Q9UL36 1845 aa15.35■□□□□ 0.05
NR1I3-201ENST00000367979 H0YGN5 161 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 RAD21O60216 631 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 FLOT1O75955 427 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 SLC34A2O95436 690 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 IGHDP01880 384 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
NR1I3-201ENST00000367979 ZKSCAN1P17029 563 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-201ENST00000367979 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-201ENST00000367979 RGS2P41220 211 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 PDE1AP54750 535 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 CACNB2Q08289 660 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-201ENST00000367979 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 GIMAP6Q6P9H5 292 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 GCC1Q96CN9 775 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 TACC3Q9Y6A5 838 aa15.34■□□□□ 0.05
NR1I3-201ENST00000367979 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.04
NR1I3-201ENST00000367979 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
NR1I3-201ENST00000367979 PTPREP23469 700 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 DSG3P32926 999 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
NR1I3-201ENST00000367979 MAP2K5Q13163 448 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 GRB14Q14449 540 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 COG2Q14746 738 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 LPAR1Q92633 364 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 SPATC1LQ9H0A9 340 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 HMX1Q9NP08 348 aaPredicted RBP15.33■□□□□ 0.04
NR1I3-201ENST00000367979 INCENPQ9NQS7 918 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
NR1I3-201ENST00000367979 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 A0A0D9SFI3 127 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 XRCC5P13010 732 aaKnown RBP15.32■□□□□ 0.04
NR1I3-201ENST00000367979 GNAT2P19087 354 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 ERCC3P19447 782 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 CCNA1P78396 465 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 PLS1Q14651 629 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 DPF3Q92784 378 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 PAWRQ96IZ0 340 aaKnown RBP15.32■□□□□ 0.04
NR1I3-201ENST00000367979 FAM227BQ96M60 508 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 SH2D4AQ9H788 454 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 KANSL2Q9H9L4 492 aa15.32■□□□□ 0.04
NR1I3-201ENST00000367979 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
NR1I3-201ENST00000367979 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
NR1I3-201ENST00000367979 PPARAQ07869 468 aa15.31■□□□□ 0.04
NR1I3-201ENST00000367979 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
NR1I3-201ENST00000367979 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
NR1I3-201ENST00000367979 LRRC47Q8N1G4 583 aaKnown RBP15.31■□□□□ 0.04
NR1I3-201ENST00000367979 NAPBQ9H115 298 aa15.31■□□□□ 0.04
NR1I3-201ENST00000367979 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms