RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 BAHD1Q8TBE0 780 aaPredicted RBP8.49□□□□□ -1.05
RNU4-40P-201ENST00000364351 MCOLN1Q9GZU1 580 aa8.49□□□□□ -1.05
RNU4-40P-201ENST00000364351 ST13P50502 369 aaKnown RBP8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 CAMK2GQ13555 558 aaPredicted RBP8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 TMEM132EQ6IEE7 984 aa8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 IRF2BP1Q8IU81 584 aa8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 SPPL2CQ8IUH8 684 aa8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 KREMEN1Q96MU8 473 aa8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 CWC22Q9HCG8 908 aaKnown RBP8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 KLHL3Q9UH77 587 aa8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 GPR160Q9UJ42 338 aa8.48□□□□□ -1.05
RNU4-40P-201ENST00000364351 FAM221AA4D161 298 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 CHURC1-FNTBB4DL54 471 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 B8ZZF3 427 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 PRRG2O14669 202 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 F13A1P00488 732 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 PF4P02776 101 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 PDE6BP35913 854 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 DAB2P98082 770 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 CLEC16AQ2KHT3 1053 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 SLFN12Q8IYM2 578 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 GATAD2BQ8WXI9 593 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 INTS4Q96HW7 963 aaKnown RBP8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 REV1Q9UBZ9 1251 aa8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 YBX2Q9Y2T7 364 aaKnown RBP8.47□□□□□ -1.05
RNU4-40P-201ENST00000364351 MYOCOSA0A1B0GUC4 107 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 SHISA3A0PJX4 238 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 CTSHP09668 335 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 DLG4P78352 724 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 XPCQ01831 940 aaPredicted RBP8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 LMNB2Q03252 620 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 NR0B2Q15466 257 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 CCDC74BQ96LY2 380 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 EBF1Q9UH73 591 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 RAPGEFL1Q9UHV5 662 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 NCANO14594 1321 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 USP31Q70CQ4 1352 aa8.46□□□□□ -1.06
RNU4-40P-201ENST00000364351 PATL2C9JE40 543 aaKnown RBP8.45□□□□□ -1.06
RNU4-40P-201ENST00000364351 GRIN3BO60391 1043 aa8.45□□□□□ -1.06
RNU4-40P-201ENST00000364351 GALK1P51570 392 aa8.45□□□□□ -1.06
RNU4-40P-201ENST00000364351 TEKQ02763 1124 aa8.45□□□□□ -1.06
RNU4-40P-201ENST00000364351 DUSP4Q13115 394 aa8.45□□□□□ -1.06
RNU4-40P-201ENST00000364351 PHACTR4Q8IZ21 702 aa8.45□□□□□ -1.06
RNU4-40P-201ENST00000364351 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
RNU4-40P-201ENST00000364351 RBM47A0AV96 593 aaKnown RBP8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 PSPNO60542 156 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 CTSWP56202 376 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 CHMP4BP1P59074 171 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 CHRNEQ04844 493 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 RELL1Q8IUW5 271 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 ANKS4BQ8N8V4 417 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 TRAIPQ9BWF2 469 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 ASPNQ9BXN1 380 aa8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 ZNF552Q9H707 407 aaPredicted RBP8.44□□□□□ -1.06
RNU4-40P-201ENST00000364351 PEX10O60683 326 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 SEMA7AO75326 666 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 HTR3BO95264 441 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 GBP2P32456 591 aaPredicted RBP8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 SNX17Q15036 470 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 SIRT2Q8IXJ6 389 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 KIF2CQ99661 725 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 SGPP1Q9BX95 441 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 KRTAP4-11Q9BYQ6 195 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 POLR3KQ9Y2Y1 108 aaPredicted RBP8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 PRR36Q9H6K5 1346 aa8.43□□□□□ -1.06
RNU4-40P-201ENST00000364351 GBP1P32455 592 aa8.42□□□□□ -1.06
RNU4-40P-201ENST00000364351 FAM160A1Q05DH4 1040 aa8.42□□□□□ -1.06
RNU4-40P-201ENST00000364351 TMC4Q7Z404 712 aa8.42□□□□□ -1.06
RNU4-40P-201ENST00000364351 ASCC2Q9H1I8 757 aaPredicted RBP8.42□□□□□ -1.06
RNU4-40P-201ENST00000364351 CNOT6Q9ULM6 557 aaKnown RBP8.42□□□□□ -1.06
RNU4-40P-201ENST00000364351 TEX51A0A1B0GUA7 166 aa8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 MINDY4BA8MYZ0 360 aa8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 HOXA5P20719 270 aa8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 RPL10P27635 214 aaKnown RBP8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 BUD31P41223 144 aaPredicted RBP8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 LINC01599Q8WXQ3 324 aa8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 RHOVQ96L33 236 aa8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 TMEM74Q96NL1 305 aa8.41□□□□□ -1.06
RNU4-40P-201ENST00000364351 DNAJA2O60884 412 aa8.4□□□□□ -1.06
RNU4-40P-201ENST00000364351 BMP7P18075 431 aa8.4□□□□□ -1.06
RNU4-40P-201ENST00000364351 SNAP47Q5SQN1 464 aa8.4□□□□□ -1.06
RNU4-40P-201ENST00000364351 SHISA4Q96DD7 197 aa8.4□□□□□ -1.06
RNU4-40P-201ENST00000364351 GCM1Q9NP62 436 aa8.4□□□□□ -1.06
RNU4-40P-201ENST00000364351 ZMYM5Q9UJ78 669 aa8.4□□□□□ -1.06
RNU4-40P-201ENST00000364351 NMIQ13287 307 aaPredicted RBP8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 SND1Q7KZF4 910 aaKnown RBP eCLIP8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 GOLM1Q8NBJ4 401 aa8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 FBXO27Q8NI29 283 aa8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 G6PC3Q9BUM1 346 aa8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 RSRP1Q9BUV0 290 aa8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 ZCCHC4Q9H5U6 513 aa8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 KCTD3Q9Y597 815 aa8.39□□□□□ -1.07
RNU4-40P-201ENST00000364351 MPP2Q14168 576 aa8.38□□□□□ -1.07
RNU4-40P-201ENST00000364351 ZNF385BQ569K4 471 aa8.38□□□□□ -1.07
RNU4-40P-201ENST00000364351 ADGRF1Q5T601 910 aa8.38□□□□□ -1.07
RNU4-40P-201ENST00000364351 WAPLQ7Z5K2 1190 aa8.38□□□□□ -1.07
RNU4-40P-201ENST00000364351 USHBP1Q8N6Y0 703 aa8.38□□□□□ -1.07
RNU4-40P-201ENST00000364351 VWCEQ96DN2 955 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms