RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MAP2K1Q02750 393 aaPredicted RBP18.27■□□□□ 0.52
SCAF1-201ENST00000360565 MICALCLQ6ZW33 695 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 NBPF26B4DH59 902 aa18.27■□□□□ 0.51
SCAF1-201ENST00000360565 IVLP07476 585 aa18.27■□□□□ 0.51
SCAF1-201ENST00000360565 NBPF14Q5TI25 921 aa18.27■□□□□ 0.51
SCAF1-201ENST00000360565 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.51
SCAF1-201ENST00000360565 SMYD4Q8IYR2 804 aaPredicted RBP18.27■□□□□ 0.51
SCAF1-201ENST00000360565 NBPF15Q8N660 670 aa18.27■□□□□ 0.51
SCAF1-201ENST00000360565 TSGA10Q9BZW7 698 aa18.27■□□□□ 0.51
SCAF1-201ENST00000360565 MMP1P03956 469 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 RPL13P26373 211 aaKnown RBP18.26■□□□□ 0.51
SCAF1-201ENST00000360565 SLC1A4P43007 532 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 KCNQ4P56696 695 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 RNASE9P60153 205 aaKnown RBP18.26■□□□□ 0.51
SCAF1-201ENST00000360565 PPP1R13BQ96KQ4 1090 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 CETN3O15182 167 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 IBSPP21815 317 aaPredicted RBP18.26■□□□□ 0.51
SCAF1-201ENST00000360565 GABPB1Q06547 395 aaPredicted RBP18.26■□□□□ 0.51
SCAF1-201ENST00000360565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAF1-201ENST00000360565 BICD1Q96G01 975 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 SPATA31A3Q5VYP0 1347 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 CERS3Q8IU89 383 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 LMBR1Q8WVP7 490 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 ATRIPQ8WXE1 791 aa18.26■□□□□ 0.51
SCAF1-201ENST00000360565 STX10O60499 249 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 NELFCDQ8IXH7 590 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 INCENPQ9NQS7 918 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 GCOM1H8Y6P7 765 aaPredicted RBP18.25■□□□□ 0.51
SCAF1-201ENST00000360565 GTPBP6O43824 516 aaPredicted RBP18.25■□□□□ 0.51
SCAF1-201ENST00000360565 MYZAPP0CAP1 466 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 SECISBP2LQ93073 1101 aaKnown RBP18.25■□□□□ 0.51
SCAF1-201ENST00000360565 CCDC51Q96ER9 411 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 DDAH1O94760 285 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 DDIT3P35638 169 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 GTF2IP78347 998 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 STOX1Q6ZVD7 989 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 HDAC9Q9UKV0 1011 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 PCDHB6Q9Y5E3 794 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 USP42Q9H9J4 1324 aaKnown RBP18.25■□□□□ 0.51
SCAF1-201ENST00000360565 PIK3C2BO00750 1634 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
SCAF1-201ENST00000360565 TECP42680 631 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 RASGRP4Q8TDF6 673 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 GSDMAQ96QA5 445 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 ATP8A2Q9NTI2 1148 aa18.25■□□□□ 0.51
SCAF1-201ENST00000360565 ERVV-1B6SEH8 477 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 TCP10Q12799 353 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 CCDC84Q86UT8 332 aaPredicted RBP18.24■□□□□ 0.51
SCAF1-201ENST00000360565 NLRC4Q9NPP4 1024 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 CDC25AP30304 524 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 TSGA10IPQ3SY00 556 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 TBC1D10CQ8IV04 446 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 NAP1L4Q99733 375 aaKnown RBP18.24■□□□□ 0.51
SCAF1-201ENST00000360565 ZBTB21Q9ULJ3 1066 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCAF1-201ENST00000360565 PARP3Q9Y6F1 533 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 ZEB2O60315 1214 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 NBPF11Q86T75 865 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 GPR161Q8N6U8 529 aaKnown RBP18.24■□□□□ 0.51
SCAF1-201ENST00000360565 GOLPH3LQ9H4A5 285 aa18.24■□□□□ 0.51
SCAF1-201ENST00000360565 CHMP2AO43633 222 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 ERCC5P28715 1186 aaPredicted RBP18.23■□□□□ 0.51
SCAF1-201ENST00000360565 ZNF804BA4D1E1 1349 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
SCAF1-201ENST00000360565 SCARF1Q14162 830 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 HAUS3Q68CZ6 603 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 BRINP3Q76B58 766 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 PKD2L1Q9P0L9 805 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 RPAP1Q9BWH6 1393 aaPredicted RBP18.23■□□□□ 0.51
SCAF1-201ENST00000360565 H7C1D1 291 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 RPN1P04843 607 aaKnown RBP18.23■□□□□ 0.51
SCAF1-201ENST00000360565 RABL6Q3YEC7 729 aaPredicted RBP18.23■□□□□ 0.51
SCAF1-201ENST00000360565 CFAP58Q5T655 872 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 MAN1B1Q9UKM7 699 aa18.23■□□□□ 0.51
SCAF1-201ENST00000360565 ZC3H13Q5T200 1668 aaKnown RBP18.23■□□□□ 0.51
SCAF1-201ENST00000360565 PCP11498 1178 aaKnown RBP18.22■□□□□ 0.51
SCAF1-201ENST00000360565 CTNNA2P26232 953 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 FOXO4P98177 505 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 SLC9C1Q4G0N8 1177 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 TYW1BQ6NUM6 668 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 RRAGAQ7L523 313 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 TBC1D22AQ8WUA7 517 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 SAMSN1Q9NSI8 373 aaKnown RBP18.22■□□□□ 0.51
SCAF1-201ENST00000360565 CASP14P31944 242 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 TNNC1P63316 161 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 SCLT1Q96NL6 688 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 PLVAPQ9BX97 442 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 TMEM110-MUSTN1A8MSY1 372 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 SLFN14P0C7P3 912 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 NCAPH2Q6IBW4 605 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 C8orf74Q6P047 294 aa18.22■□□□□ 0.51
SCAF1-201ENST00000360565 GDAP1L1Q96MZ0 367 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms