RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FXR1P51114 621 aaKnown RBP eCLIP6.64□□□□□ -1.35
CD47-201ENST00000355354 EP400NLQ6ZTU2 488 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 ZSWIM5Q9P217 1185 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 FAM196BA6NMK8 535 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 IGHA2P01877 340 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 RPAP2Q8IXW5 612 aaPredicted RBP6.64□□□□□ -1.35
CD47-201ENST00000355354 PCDHB6Q9Y5E3 794 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 STX17P56962 302 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 RAD9BQ6WBX8 426 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 PNKPQ96T60 521 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 FHOD1Q9Y613 1164 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 CHD8Q9HCK8 2581 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 CABIN1Q9Y6J0 2220 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 UTYO14607 1347 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 A0A1B0GUL7 405 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 B4E1Z4 1266 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 PIAS1O75925 651 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 VEGFBP49765 207 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 BCAMP50895 628 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 CALD1Q05682 793 aaKnown RBP6.63□□□□□ -1.35
CD47-201ENST00000355354 DGKZQ13574 1117 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 FMR1NBQ8N0W7 255 aaPredicted RBP6.63□□□□□ -1.35
CD47-201ENST00000355354 ROS1P08922 2347 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 IKBKBO14920 756 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 DYNLL1P63167 89 aaKnown RBP6.63□□□□□ -1.35
CD47-201ENST00000355354 PTPAQ15257 358 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 TOGARAM2Q6ZUX3 1019 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 TMC4Q7Z404 712 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 TTLL11Q8NHH1 800 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 CYTH3O43739 400 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 PNMA6AP0CW24 399 aaPredicted RBP6.63□□□□□ -1.35
CD47-201ENST00000355354 C15orf52Q6ZUT6 534 aaKnown RBP6.63□□□□□ -1.35
CD47-201ENST00000355354 KCNB2Q92953 911 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 SPTLC3Q9NUV7 552 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 FANCLQ9NW38 375 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 ATP6V0A2Q9Y487 856 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 ADGRA2Q96PE1 1338 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 ATG2BQ96BY7 2078 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 CACNA1EQ15878 2313 aa6.63□□□□□ -1.35
CD47-201ENST00000355354 CALCAP01258 141 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 GRIPAP1Q4V328 841 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 NR2E1Q9Y466 385 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 NINQ8N4C6 2090 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 E7EWF7 191 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 MAP3K12Q12852 859 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 UBE2Q1Q7Z7E8 422 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 SAPCD2Q86UD0 394 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 NEUROD6Q96NK8 337 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 TRIM49BA6NDI0 452 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 ERICH4A6NGS2 130 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 AAMPQ13685 434 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 ERFEQ4G0M1 354 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 TNNI3KQ59H18 835 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 C2CD5Q86YS7 1000 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
CD47-201ENST00000355354 RNF181Q9P0P0 153 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 PCDHA5Q9Y5H7 936 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 FPGT-TNNI3KV9GXZ4 949 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 TRIP11Q15643 1979 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 ZBTB39O15060 712 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 DDNO94850 711 aaPredicted RBP6.62□□□□□ -1.35
CD47-201ENST00000355354 HSPA1AP0DMV8 641 aaKnown RBP6.62□□□□□ -1.35
CD47-201ENST00000355354 HSPA1BP0DMV9 641 aaKnown RBP6.62□□□□□ -1.35
CD47-201ENST00000355354 NYAP1Q6ZVC0 841 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 ZNF592Q92610 1267 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 PSMB7Q99436 277 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 ACP6Q9NPH0 428 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 USP20Q9Y2K6 914 aa6.62□□□□□ -1.35
CD47-201ENST00000355354 ZNF185O15231 689 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 SNRPA1P09661 255 aaKnown RBP6.61□□□□□ -1.35
CD47-201ENST00000355354 MTX1Q13505 466 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 SGSM1Q2NKQ1 1148 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 NLRP10Q86W26 655 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 PLA2G4DQ86XP0 818 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 IL17RAQ96F46 866 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 SHTN1A0MZ66 631 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 PLEKHA8P1O95397 391 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 PRDX5P30044 214 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 ZNF165P49910 485 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 KIAA2012Q0VF49 1180 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 RABEP1Q15276 862 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 AOPEPQ8N6M6 819 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 PLA2G12BQ9BX93 195 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 ECHDC1Q9NTX5 307 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 SETD2Q9BYW2 2564 aaPredicted RBP6.61□□□□□ -1.35
CD47-201ENST00000355354 ANKRD11Q6UB99 2663 aaPredicted RBP6.61□□□□□ -1.35
CD47-201ENST00000355354 ECM2O94769 699 aaPredicted RBP6.61□□□□□ -1.35
CD47-201ENST00000355354 MAP3K11Q16584 847 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 ANKRD7Q92527 254 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 GPRC5DQ9NZD1 345 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 MTMR7Q9Y216 660 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 ENC1O14682 589 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 MAP3K13O43283 966 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 KMT5AQ9NQR1 393 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 SAGE1Q9NXZ1 904 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 PDZD2O15018 2839 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 FBN2P35556 2912 aa6.61□□□□□ -1.35
CD47-201ENST00000355354 SIP14410 1827 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms