RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CDCA7LQ96GN5 454 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 ING2Q9H160 280 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 STOML1Q9UBI4 398 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 ERBINQ96RT1 1412 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 PRDM1O75626 825 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 MMEP08473 750 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 CCT6AP40227 531 aaKnown RBP6.77□□□□□ -1.33
VCAN-203ENST00000343200 ALDH1L2Q3SY69 923 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 TRIML1Q8N9V2 468 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 HYOU1Q9Y4L1 999 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 KIAA1217Q5T5P2 1943 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 DTNBO60941 627 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 CNGA3Q16281 694 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 RARS2Q5T160 578 aaKnown RBP6.77□□□□□ -1.33
VCAN-203ENST00000343200 CCDC105Q8IYK2 499 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 GRK7Q8WTQ7 553 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 BICC1Q9H694 974 aaKnown RBP6.77□□□□□ -1.33
VCAN-203ENST00000343200 ZRANB1Q9UGI0 708 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 TADA3O75528 432 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 PPP1R2P41236 205 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 DAB2P98082 770 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 TERF2Q15554 542 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 OGFOD1Q8N543 542 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 USP33Q8TEY7 942 aa6.77□□□□□ -1.33
VCAN-203ENST00000343200 SLC4A2P04920 1241 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 AFMP43652 599 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 GUCY1A3Q02108 690 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 TRIML2Q8N7C3 387 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 EVI5LQ96CN4 794 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 TUBA8Q9NY65 449 aaPredicted RBP6.76□□□□□ -1.33
VCAN-203ENST00000343200 UNC13CQ8NB66 2214 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 S100A5P33763 92 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 ASIC1P78348 528 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 NXNQ6DKJ4 435 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 CECR2Q9BXF3 1484 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 KIF26BQ2KJY2 2108 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 RNF169Q8NCN4 708 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 SERPINB2P05120 415 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 SCG2P13521 617 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 STRN3Q13033 797 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 RASA3Q14644 834 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 RNF207Q6ZRF8 634 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 LEO1Q8WVC0 666 aaPredicted RBP6.76□□□□□ -1.33
VCAN-203ENST00000343200 TRIM63Q969Q1 353 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 GINS4Q9BRT9 223 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 TRAIPQ9BWF2 469 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 UPF3AQ9H1J1 476 aaKnown RBP6.76□□□□□ -1.33
VCAN-203ENST00000343200 LRP2BPQ9P2M1 347 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 STRIP2Q9ULQ0 834 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 DAPK1P53355 1430 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 ZMYM4Q5VZL5 1548 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 CCDC151A5D8V7 595 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 SPTLC2O15270 562 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 DNM1Q05193 864 aaKnown RBP6.76□□□□□ -1.33
VCAN-203ENST00000343200 PEX26Q7Z412 305 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 HDDC2Q7Z4H3 204 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 QKIQ96PU8 341 aaKnown RBP eCLIP6.76□□□□□ -1.33
VCAN-203ENST00000343200 AKAP6Q13023 2319 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 PYGMP11217 842 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 GUCY2FP51841 1108 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 ZNF354CQ86Y25 554 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 ENOX1Q8TC92 643 aaKnown RBP6.76□□□□□ -1.33
VCAN-203ENST00000343200 CARD6Q9BX69 1037 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 LRRC9Q6ZRR7 1453 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 CFAP73A6NFT4 308 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 GJC1P36383 396 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 DEFA1P59665 94 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 DEFA3P59666 94 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 KIF23Q02241 960 aaPredicted RBP6.76□□□□□ -1.33
VCAN-203ENST00000343200 LIN9Q5TKA1 542 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 PARP9Q8IXQ6 854 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 TTC16Q8NEE8 873 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 TSPOAP1O95153 1857 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 SNX1Q13596 522 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 STAC3Q96MF2 364 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 STMN3Q9NZ72 180 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 CTNND2Q9UQB3 1225 aa6.76□□□□□ -1.33
VCAN-203ENST00000343200 CCT2P78371 535 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 KANK4Q5T7N3 995 aaPredicted RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 CEP250Q9BV73 2442 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 STX3Q13277 289 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 RCN2Q14257 317 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 SND1Q7KZF4 910 aaKnown RBP eCLIP6.75□□□□□ -1.335e-7■■■■■ 28.2
VCAN-203ENST00000343200 NDEL1Q9GZM8 345 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 ATP11BQ9Y2G3 1177 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CTNND1O60716 968 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 RPL13P26373 211 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 ECE1P42892 770 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CRYMQ14894 314 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 GRAMD1BQ3KR37 738 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 TTC22Q5TAA0 569 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 NBPF14Q5TI25 921 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CC2D2BQ6DHV5 1058 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CASC4Q6P4E1 433 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CNNM4Q6P4Q7 775 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CDH24Q86UP0 819 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 MAPK13O15264 365 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 MAN1A1P33908 653 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 AP1B1Q10567 949 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms