RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 JPH2Q9BR39 696 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 RBM42Q9BTD8 480 aaKnown RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 ABCF2Q9UG63 623 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CFAP74Q9C0B2 1584 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PRAG1Q86YV5 1406 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 ADCY2Q08462 1091 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 BIRC3Q13489 604 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 UAP1Q16222 522 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PDE11AQ9HCR9 933 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PPANQ9NQ55 473 aaKnown RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 TMOD3Q9NYL9 352 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 IPO5O00410 1097 aaKnown RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 IKBKBO14920 756 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 ANO1Q5XXA6 986 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PPP1R42Q7Z4L9 355 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PSPC1Q8WXF1 523 aaKnown RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 SCHIP1Q9P0W5 487 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 STOML1Q9UBI4 398 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 TAF11Q15544 211 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CARD6Q9BX69 1037 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CBX8Q9HC52 389 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PALM3A6NDB9 673 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CHGBP05060 677 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 EEF1DP29692 281 aaKnown RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PDZD4Q76G19 769 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CCDC117Q8IWD4 279 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 PDZD8Q8NEN9 1154 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 STAMBPL1Q96FJ0 436 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 GIMAP4Q9NUV9 329 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 UBE4BO95155 1302 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 P4HA1P13674 534 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CREB3L3Q68CJ9 461 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 ZNF804AQ7Z570 1209 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 TOPBP1Q92547 1522 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 H0YCG3 227 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 LAD1O00515 517 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 SMARCA5O60264 1052 aaPredicted RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 IGHDP01880 384 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 RAD51AP2Q09MP3 1159 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 TERB1Q8NA31 727 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CABP1Q9NZU7 370 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 RAD54L2Q9Y4B4 1467 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 LIG3P49916 1009 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 DNM2P50570 870 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 TTLL7Q6ZT98 887 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 GUCY1B3Q02153 619 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 VPS37BQ9H9H4 285 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 SPC25Q9HBM1 224 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 MBIPQ9NS73 344 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 FOXP2O15409 715 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 KRT8P05787 483 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ATP8B2P98198 1209 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 CUL4BQ13620 913 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 CUEDC2Q9H467 287 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 TMEM110-MUSTN1A8MSY1 372 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 SLC12A2P55011 1212 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 PLCB4Q15147 1175 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 TERF2Q15554 542 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 TEX2Q8IWB9 1127 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 THEMISQ8N1K5 641 aaPredicted RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 WDR46O15213 610 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 CLTAP09496 248 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 TNFAIP3P21580 790 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ETF1P62495 437 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ANKRD35Q8N283 1001 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 CSGALNACT2Q8N6G5 542 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ARMC2Q8NEN0 867 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 NSMCE1Q8WV22 266 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 PPP1R13BQ96KQ4 1090 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 NUB1Q9Y5A7 615 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 RBM6P78332 1123 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 KRR1Q13601 381 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 KRT25Q7Z3Z0 450 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ANKLE2Q86XL3 938 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 CEP19Q96LK0 163 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 MOV10L1Q9BXT6 1211 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 DISP3Q9P2K9 1392 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 CFAP61Q8NHU2 1237 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ANKRD27Q96NW4 1050 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 EEF1GP26641 437 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 MAP3K10Q02779 954 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 KLHL30Q0D2K2 578 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 LONRF2Q1L5Z9 754 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 TRIM56Q9BRZ2 755 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ABCC1P33527 1531 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 VGLL3A8MV65 326 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 SYF2O95926 243 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 ADALQ6DHV7 355 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 GALNT17Q6IS24 598 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 MCM10Q7L590 875 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 C3orf20Q8ND61 904 aa6.06□□□□□ -1.44
PTPRB-202ENST00000334414 TDRD7Q8NHU6 1098 aaKnown RBP6.06□□□□□ -1.44
PTPRB-202ENST00000334414 CHMLP26374 656 aa6.05□□□□□ -1.44
PTPRB-202ENST00000334414 ATG16L1Q676U5 607 aa6.05□□□□□ -1.44
PTPRB-202ENST00000334414 INTS9Q9NV88 658 aaKnown RBP6.05□□□□□ -1.44
PTPRB-202ENST00000334414 CDC23Q9UJX2 597 aa6.05□□□□□ -1.44
PTPRB-202ENST00000334414 MARCKSP29966 332 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms