RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 FPGT-TNNI3KV9GXZ4 949 aa11.62□□□□□ -0.55
SF3B2-201ENST00000322535 ADCK5Q3MIX3 580 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 ERFEQ4G0M1 354 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 GET4Q7L5D6 327 aaPredicted RBP11.61□□□□□ -0.55
SF3B2-201ENST00000322535 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
SF3B2-201ENST00000322535 ZNF34Q8IZ26 560 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 FAM71BQ8TC56 605 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 BCAS4Q8TDM0 211 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 DESI2Q9BSY9 194 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 ECHDC1Q9NTX5 307 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 ANO10Q9NW15 660 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 TJP1Q07157 1748 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 TMCO5BA8MYB1 307 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 ZEB2O60315 1214 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 E2F5Q15329 346 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 RBM43Q6ZSC3 357 aaKnown RBP11.61□□□□□ -0.55
SF3B2-201ENST00000322535 SDF4Q9BRK5 362 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 PHACTR1Q9C0D0 580 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 CNNM1Q9NRU3 951 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 KCND1Q9NSA2 647 aa11.61□□□□□ -0.55
SF3B2-201ENST00000322535 LRRIQ3A6PVS8 624 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-201ENST00000322535 PPFIA3O75145 1194 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 CAVIN2O95810 425 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 FNTAP49354 379 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 CTSWP56202 376 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 TLDC1Q6P9B6 456 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 FAM227BQ96M60 508 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 OSBPL3Q9H4L5 887 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 ANKZF1Q9H8Y5 726 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 IMPACTQ9P2X3 320 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 RTCBQ9Y3I0 505 aaKnown RBP11.6□□□□□ -0.55
SF3B2-201ENST00000322535 ATRNO75882 1429 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 PPP1R12BO60237 982 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-201ENST00000322535 ONECUT3O60422 494 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-201ENST00000322535 ZPR1O75312 459 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 VSNL1P62760 191 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 PRPF40BQ6NWY9 871 aaKnown RBP11.6□□□□□ -0.55
SF3B2-201ENST00000322535 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 NAT10Q9H0A0 1025 aaKnown RBP11.6□□□□□ -0.55
SF3B2-201ENST00000322535 L1RE1Q9UN81 338 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 MAPK8IP1Q9UQF2 711 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
SF3B2-201ENST00000322535 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 EYA2O00167 538 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 CCDC181Q5TID7 509 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 CCDC73Q6ZRK6 1079 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 PROM2Q8N271 834 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 IGSF22Q8N9C0 903 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 LZTFL1Q9NQ48 299 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 STAP2Q9UGK3 403 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 NUP188Q5SRE5 1749 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 N4BP2Q86UW6 1770 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 ZSCAN12O43309 604 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 KIAA0754O94854 1291 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 APBA3O96018 575 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 TUBB4AP04350 444 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 RFC4P35249 363 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 ST3GAL1Q11201 340 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 EXOC8Q8IYI6 725 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 OR8K1Q8NGG5 319 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 MTRQ99707 1265 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 KAT14Q9H8E8 782 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 RGS17Q9UGC6 210 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 IQSEC3Q9UPP2 1182 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 DPCR1Q3MIW9 517 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 METTL24Q5JXM2 366 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 RNF187Q5TA31 235 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 SCLT1Q96NL6 688 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 SEC62Q99442 399 aaKnown RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 MMADHCQ9H3L0 296 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-201ENST00000322535 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
SF3B2-201ENST00000322535 BTAF1O14981 1849 aa11.58□□□□□ -0.55
SF3B2-201ENST00000322535 NUP98P52948 1817 aa11.58□□□□□ -0.55
SF3B2-201ENST00000322535 SHTN1A0MZ66 631 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 LRRC10BA6NIK2 292 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 ERVV-1B6SEH8 477 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 SERPINC1P01008 464 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 TRIM28Q13263 835 aaKnown RBP11.58□□□□□ -0.56
SF3B2-201ENST00000322535 CFAP100Q494V2 611 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 A0A1B0GVG6 124 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 H3BQV1 296 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
SF3B2-201ENST00000322535 AKAP17AQ02040 695 aaKnown RBP11.58□□□□□ -0.56
SF3B2-201ENST00000322535 PPARDQ03181 441 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 IFFO2Q5TF58 517 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 FSD1Q9BTV5 496 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 GOLPH3LQ9H4A5 285 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 POLD4Q9HCU8 107 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 CEP126Q9P2H0 1117 aa11.58□□□□□ -0.56
SF3B2-201ENST00000322535 TPCN1Q9ULQ1 816 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms