RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 AKR1B1P15121 316 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 LIG1P18858 919 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 FKBP1CQ5VVH2 108 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 JMYQ8N9B5 988 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 PRMT6Q96LA8 375 aaPredicted RBP20.57■□□□□ 0.88
RAB39A-201ENST00000320578 BRMS1Q9HCU9 246 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.57■□□□□ 0.88
RAB39A-201ENST00000320578 KCNJ14Q9UNX9 436 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 PCDHAC2Q9Y5I4 1007 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 RAD17O75943 681 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 ME1P48163 572 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 TATDN1Q6P1N9 297 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 ZFPM1Q8IX07 1006 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 PCDHA7Q9UN72 937 aa20.57■□□□□ 0.88
RAB39A-201ENST00000320578 TTLL1O95922 423 aa20.56■□□□□ 0.88
RAB39A-201ENST00000320578 PARP1P09874 1014 aaKnown RBP20.56■□□□□ 0.88
RAB39A-201ENST00000320578 KRT2P35908 639 aa20.56■□□□□ 0.88
RAB39A-201ENST00000320578 PTGER2P43116 358 aa20.56■□□□□ 0.88
RAB39A-201ENST00000320578 SF3A1Q15459 793 aaKnown RBP20.56■□□□□ 0.88
RAB39A-201ENST00000320578 SH3BP5LQ7L8J4 393 aa20.56■□□□□ 0.88
RAB39A-201ENST00000320578 TDRD3Q9H7E2 651 aaKnown RBP20.56■□□□□ 0.88
RAB39A-201ENST00000320578 TMOD2Q9NZR1 351 aa20.56■□□□□ 0.88
RAB39A-201ENST00000320578 FER1L6Q2WGJ9 1857 aa20.56■□□□□ 0.88
RAB39A-201ENST00000320578 DDTLA6NHG4 134 aaPredicted RBP20.55■□□□□ 0.88
RAB39A-201ENST00000320578 SNHG28P0DPA3 235 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 PTPAQ15257 358 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 DLGAP5Q15398 846 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 RBM43Q6ZSC3 357 aaKnown RBP20.55■□□□□ 0.88
RAB39A-201ENST00000320578 STAG2Q8N3U4 1231 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 JDP2Q8WYK2 163 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 SHISA4Q96DD7 197 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 NUP62CLQ9H1M0 184 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 TSPY26PQ9H489 355 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 CLSTN2Q9H4D0 955 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 DACT1Q9NYF0 836 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 VPS54Q9P1Q0 977 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 CALML3P27482 149 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 GALNT17Q6IS24 598 aa20.55■□□□□ 0.88
RAB39A-201ENST00000320578 CCAR1Q8IX12 1150 aaKnown RBP20.55■□□□□ 0.88
RAB39A-201ENST00000320578 MYH6P13533 1939 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 GREB1LQ9C091 1923 aaPredicted RBP20.54■□□□□ 0.88
RAB39A-201ENST00000320578 KLRF2D3W0D1 207 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 CXCL9Q07325 125 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 TNIP1Q15025 636 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 ASPRV1Q53RT3 343 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 CIAPIN1Q6FI81 312 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 ENGASEQ8NFI3 743 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 ZBED3Q96IU2 234 aaPredicted RBP20.54■□□□□ 0.88
RAB39A-201ENST00000320578 DNAJC18Q9H819 358 aa20.54■□□□□ 0.88
RAB39A-201ENST00000320578 NFKBIEO00221 500 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 CTAGE5O15320 804 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 CACNB3P54284 484 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 FAM160A1Q05DH4 1040 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 TCP10Q12799 353 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 NPY5RQ15761 445 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 SPDYE2Q495Y8 402 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 CCDC73Q6ZRK6 1079 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 MRPS27Q92552 414 aaKnown RBP20.53■□□□□ 0.88
RAB39A-201ENST00000320578 TNFRSF25Q93038 417 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 MKL1Q969V6 931 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 NR1I2O75469 434 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 CMA1P23946 247 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 RPS12P25398 132 aaKnown RBP20.53■□□□□ 0.88
RAB39A-201ENST00000320578 AXDND1Q5T1B0 1012 aaPredicted RBP20.53■□□□□ 0.88
RAB39A-201ENST00000320578 FAM151AQ8WW52 585 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 FUCA2Q9BTY2 467 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 TRIM34Q9BYJ4 488 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 NYAP2Q9P242 653 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 ZNF70Q9UC06 446 aaPredicted RBP20.53■□□□□ 0.88
RAB39A-201ENST00000320578 HERC5Q9UII4 1024 aaKnown RBP20.53■□□□□ 0.88
RAB39A-201ENST00000320578 CEP131Q9UPN4 1083 aa20.53■□□□□ 0.88
RAB39A-201ENST00000320578 CYTH3O43739 400 aa20.52■□□□□ 0.88
RAB39A-201ENST00000320578 PDHBP11177 359 aa20.52■□□□□ 0.88
RAB39A-201ENST00000320578 TOB1P50616 345 aaPredicted RBP20.52■□□□□ 0.88
RAB39A-201ENST00000320578 MAP3K11Q16584 847 aa20.52■□□□□ 0.88
RAB39A-201ENST00000320578 SLC35G1Q2M3R5 365 aa20.52■□□□□ 0.88
RAB39A-201ENST00000320578 CERKLQ49MI3 558 aaPredicted RBP20.52■□□□□ 0.88
RAB39A-201ENST00000320578 ZSCAN29Q8IWY8 852 aaPredicted RBP20.52■□□□□ 0.88
RAB39A-201ENST00000320578 DAGLBQ8NCG7 672 aa20.52■□□□□ 0.88
RAB39A-201ENST00000320578 CCDC148Q8NFR7 591 aa20.52■□□□□ 0.88
RAB39A-201ENST00000320578 KANSL2Q9H9L4 492 aa20.52■□□□□ 0.88
RAB39A-201ENST00000320578 SIPA1L1O43166 1804 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 hCG_1984214I3L0E3 225 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 BMP15O95972 392 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 TRAPPC10P48553 1259 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 NR5A1Q13285 461 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 SNW1Q13573 536 aaKnown RBP20.51■□□□□ 0.87
RAB39A-201ENST00000320578 FAM83AQ86UY5 434 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 ZNF713Q8N859 430 aaPredicted RBP20.51■□□□□ 0.87
RAB39A-201ENST00000320578 OXER1Q8TDS5 423 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 RBSNQ9H1K0 784 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 RIOX1Q9H6W3 641 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 SYNPO2Q9UMS6 1093 aa20.51■□□□□ 0.87
RAB39A-201ENST00000320578 hCG_1642624A0A1W2PR95 340 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 NLRP5P59047 1200 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 FSIP1Q8NA03 581 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 TNMDQ9H2S6 317 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 BARHL2Q9NY43 387 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms