RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 MAP9Q49MG5 647 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 DHX32Q7L7V1 743 aaKnown RBP18.31■□□□□ 0.52
CCDC8-201ENST00000307522 RAB21Q9UL25 225 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 ZEB2O60315 1214 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 ZPR1O75312 459 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 CCDC152Q4G0S7 254 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 ANO1Q5XXA6 986 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 VGLL2Q8N8G2 317 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 GIMAP7Q8NHV1 300 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 GUCA1BQ9UMX6 200 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 IKBKBO14920 756 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 PRC1O43663 620 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 PAX7P23759 505 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 GNGT1P63211 74 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 PUM3Q15397 648 aaKnown RBP18.3■□□□□ 0.52
CCDC8-201ENST00000307522 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
CCDC8-201ENST00000307522 TBC1D10CQ8IV04 446 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 CEP89Q96ST8 783 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 hCG_1642624A0A1W2PR95 340 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 IRAK1P51617 712 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 SWT1Q5T5J6 900 aaKnown RBP18.3■□□□□ 0.52
CCDC8-201ENST00000307522 KCTD16Q68DU8 428 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 FAM196AQ6ZSG2 479 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 SMYD4Q8IYR2 804 aaPredicted RBP18.3■□□□□ 0.52
CCDC8-201ENST00000307522 KCNG4Q8TDN1 519 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 HNRNPLLQ8WVV9 542 aaKnown RBP18.3■□□□□ 0.52
CCDC8-201ENST00000307522 SLF1Q9BQI6 1058 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
CCDC8-201ENST00000307522 ITGB4P16144 1822 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC8-201ENST00000307522 KRT32Q14532 448 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
CCDC8-201ENST00000307522 MSANTD4Q8NCY6 345 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 SLIT2O94813 1529 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 CDHR2Q9BYE9 1310 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 NEBLO76041 1014 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 USP5P45974 858 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 ADGRA1Q86SQ6 560 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 TXNRD3Q86VQ6 643 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 CEP57Q86XR8 500 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 N4BP2L2Q92802 583 aaPredicted RBP18.29■□□□□ 0.52
CCDC8-201ENST00000307522 PHKBQ93100 1093 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 NHSL1Q5SYE7 1610 aa18.29■□□□□ 0.52
CCDC8-201ENST00000307522 A0A1W2PQ27 194 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 A0A1W2PQ64 194 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 A0A1W2PQD8 194 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 PRPF6O94906 941 aaKnown RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 SLC5A1P13866 664 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 CCT6AP40227 531 aaKnown RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 GRIN1Q05586 938 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 STIM1Q13586 685 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 LCORLQ8N3X6 602 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 APPBP2Q92624 585 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 N4BP2Q86UW6 1770 aaPredicted RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 GOLGA6CA6NDK9 693 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 ERVV-1B6SEH8 477 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 GOLGA6DP0CG33 693 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 CASP14P31944 242 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 DYNLL1P63167 89 aaKnown RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 PDCLQ13371 301 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 RNF187Q5TA31 235 aaPredicted RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 SETDB2Q96T68 719 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 CRACR2AQ9BSW2 395 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 GOLGA6AQ9NYA3 693 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 TRIM37O94972 964 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 CPP00450 1065 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 TBX2Q13207 712 aaPredicted RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 PRPF38AQ8NAV1 312 aaKnown RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 LPIN2Q92539 896 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 COL16A1Q07092 1604 aaPredicted RBP18.28■□□□□ 0.52
CCDC8-201ENST00000307522 TAF1P21675 1872 aa18.28■□□□□ 0.52
CCDC8-201ENST00000307522 GOLGA6L9A6NEM1 432 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 AKR1B15C9JRZ8 316 aaPredicted RBP18.27■□□□□ 0.52
CCDC8-201ENST00000307522 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCDC8-201ENST00000307522 NFXL1Q6ZNB6 911 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 FCHSD1Q86WN1 690 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 SH2D3CQ8N5H7 860 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 FAM76AQ8TAV0 307 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 ZNF622Q969S3 477 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCDC8-201ENST00000307522 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.52
CCDC8-201ENST00000307522 CPLX1O14810 134 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 CYB5R4Q7L1T6 521 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 MMS19Q96T76 1030 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 GPR108Q9NPR9 543 aa18.27■□□□□ 0.52
CCDC8-201ENST00000307522 MYH14Q7Z406 1995 aaKnown RBP18.27■□□□□ 0.52
CCDC8-201ENST00000307522 ATP2C2O75185 946 aa18.27■□□□□ 0.51
CCDC8-201ENST00000307522 ADD2P35612 726 aa18.27■□□□□ 0.51
CCDC8-201ENST00000307522 PPFIBP1Q86W92 1011 aa18.27■□□□□ 0.51
CCDC8-201ENST00000307522 ANKRD18AQ8IVF6 992 aa18.27■□□□□ 0.51
CCDC8-201ENST00000307522 ZNF526Q8TF50 670 aaPredicted RBP18.27■□□□□ 0.51
CCDC8-201ENST00000307522 MED15Q96RN5 788 aa18.27■□□□□ 0.51
CCDC8-201ENST00000307522 ZNF185O15231 689 aa18.26■□□□□ 0.51
CCDC8-201ENST00000307522 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
CCDC8-201ENST00000307522 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCDC8-201ENST00000307522 AFF2P51816 1311 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms