RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.03□□□□□ -1.28
ZNF440-201ENST00000304060 GPR75-ASB3A0A0A6YYF3 556 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 EFCAB14O75071 495 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 MAP3K21Q5TCX8 1036 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 ERC1Q8IUD2 1116 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 PUS3Q9BZE2 481 aaKnown RBP7.02□□□□□ -1.29
ZNF440-201ENST00000304060 FTOQ9C0B1 505 aaKnown RBP eCLIP7.02□□□□□ -1.29
ZNF440-201ENST00000304060 SWAP70Q9UH65 585 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 HOXC6P09630 235 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 MS4A1P11836 297 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 CYP7A1P22680 504 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 PRDX5P30044 214 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 NFIAQ12857 509 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 ZSCAN25Q6NSZ9 544 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 CT47B1P0C2W7 299 aaPredicted RBP7.02□□□□□ -1.29
ZNF440-201ENST00000304060 BFSP2Q13515 415 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 CCDC85BQ15834 202 aaPredicted RBP7.02□□□□□ -1.29
ZNF440-201ENST00000304060 CCDC102BQ68D86 513 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 SUGP1Q8IWZ8 645 aaKnown RBP7.02□□□□□ -1.29
ZNF440-201ENST00000304060 GUCD1Q96NT3 240 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 FAM198AQ9UFP1 575 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 DIS3Q9Y2L1 958 aaKnown RBP7.02□□□□□ -1.29
ZNF440-201ENST00000304060 SCN9AQ15858 1988 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 SSC5DA1L4H1 1573 aa7.02□□□□□ -1.29
ZNF440-201ENST00000304060 KIAA0355O15063 1070 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 PARNO95453 639 aaKnown RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 EP400NLQ6ZTU2 488 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 POLR3EQ9NVU0 708 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 GAKO14976 1311 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 ELP1O95163 1332 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 CCND3P30281 292 aaPredicted RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 TMEM67Q5HYA8 995 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 SPATA5Q8NB90 893 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 POP1Q99575 1024 aaKnown RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 CXXC1Q9P0U4 656 aaPredicted RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 GJD2Q9UKL4 321 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 ZNF521Q96K83 1311 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 ZNF646O15015 1829 aaPredicted RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 NCK2O43639 380 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 ATXN8OSP0DMR3 200 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 COL6A1P12109 1028 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 CYP2C19P33261 490 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 LAMB2P55268 1798 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 TREML2Q5T2D2 321 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 MAPKAPK5Q8IW41 473 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 TSPYL6Q8N831 410 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 KIAA1683Q9H0B3 1180 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 PHF24Q9UPV7 400 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 ASB14A6NK59 587 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 IDH1O75874 414 aaKnown RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 C6orf222P0C671 652 aaPredicted RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 LRRC24Q50LG9 513 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 MFSD5Q6N075 450 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 TGFBRAP1Q8WUH2 860 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 HLA-CQ95604 372 aa7.01□□□□□ -1.29
ZNF440-201ENST00000304060 RPAP3Q9H6T3 665 aaPredicted RBP7.01□□□□□ -1.29
ZNF440-201ENST00000304060 E9PSI1 815 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 KPNA6O60684 536 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 GH2P01242 217 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 ADORA2AP29274 412 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 C1orf53Q5VUE5 145 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 PRDM12Q9H4Q4 367 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 IL23AQ9NPF7 189 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 PCDHA11Q9Y5I1 949 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 VAMP4O75379 141 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 RFC2P35250 354 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 CASP7P55210 303 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 LRRC41Q15345 812 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 RABL6Q3YEC7 729 aaPredicted RBP7□□□□□ -1.29
ZNF440-201ENST00000304060 TMEM179Q6ZVK1 233 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 ANKRD35Q8N283 1001 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 PDLIM7Q9NR12 457 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 WDR46O15213 610 aaKnown RBP7□□□□□ -1.29
ZNF440-201ENST00000304060 TIMP1P01033 207 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 RFX1P22670 979 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 FAM47CQ5HY64 1035 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 CDAN1Q8IWY9 1227 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 C12orf42Q96LP6 360 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 SLC9A7Q96T83 725 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 SPATC1LQ9H0A9 340 aa7□□□□□ -1.29
ZNF440-201ENST00000304060 ZNF536O15090 1300 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 PSME4Q14997 1843 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 SRGAP3O43295 1099 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 HMMRO75330 724 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 GDF11O95390 407 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 IRX6P78412 446 aaPredicted RBP6.99□□□□□ -1.29
ZNF440-201ENST00000304060 MECOMQ03112 1051 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 GNASQ5JWF2 1037 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 RNF216Q9NWF9 866 aaPredicted RBP6.99□□□□□ -1.29
ZNF440-201ENST00000304060 A0A1B0GUL7 405 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 MORN1Q5T089 497 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 FAM9BQ8IZU0 186 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 ADD3Q9UEY8 706 aaKnown RBP6.99□□□□□ -1.29
ZNF440-201ENST00000304060 GNAI2P04899 355 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 SRGAP2BP0DMP2 458 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 STAT3P40763 770 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 PHKA1P46020 1223 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 CATSPERGQ6ZRH7 1159 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 XAGE2Q96GT9 111 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 432.8 ms