RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
SHANK3-201ENST00000262795 KDRP35968 1356 aa17.58■□□□□ 0.41
SHANK3-201ENST00000262795 CHRNDQ07001 517 aa17.58■□□□□ 0.41
SHANK3-201ENST00000262795 VPS54Q9P1Q0 977 aa17.58■□□□□ 0.41
SHANK3-201ENST00000262795 USP17L12C9JPN9 530 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 USP17L21D6R901 530 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 DNAJC21Q5F1R6 531 aaKnown RBP17.58■□□□□ 0.4
SHANK3-201ENST00000262795 METTL23Q86XA0 190 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 FBXO11Q86XK2 927 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
SHANK3-201ENST00000262795 MRPL11Q9Y3B7 192 aaKnown RBP17.58■□□□□ 0.4
SHANK3-201ENST00000262795 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 K7ENM7 598 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 KIF2AO00139 706 aaPredicted RBP17.58■□□□□ 0.4
SHANK3-201ENST00000262795 GNL1P36915 607 aaPredicted RBP17.58■□□□□ 0.4
SHANK3-201ENST00000262795 ASIC2Q16515 512 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 SPECC1LQ69YQ0 1117 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 C10orf67Q8IYJ2 551 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 PCDHB13Q9Y5F0 798 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 SETD1BQ9UPS6 1966 aaKnown RBP17.58■□□□□ 0.4
SHANK3-201ENST00000262795 HS1BP3Q53T59 392 aa17.58■□□□□ 0.4
SHANK3-201ENST00000262795 UBLCP1Q8WVY7 318 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-201ENST00000262795 PSTPIP2Q9H939 334 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 MTRQ99707 1265 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 KIF5AQ12840 1032 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 VPS52Q8N1B4 723 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 COA7Q96BR5 231 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 A0A1B0GVL5 298 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 HGSO14964 777 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-201ENST00000262795 NOLC1Q14978 699 aaKnown RBP eCLIP17.57■□□□□ 0.43e-8■□□□□ 8.2
SHANK3-201ENST00000262795 PTPROQ16827 1216 aa17.57■□□□□ 0.4
SHANK3-201ENST00000262795 PPP2R5AQ15172 486 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 UNC5CLQ8IV45 518 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 CCDC110Q8TBZ0 833 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 BLZF1Q9H2G9 400 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 INO80B-WBP1J3KQ70 363 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 DPYSL4O14531 572 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 SF3A3Q12874 501 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■□□□ 13.6
SHANK3-201ENST00000262795 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
SHANK3-201ENST00000262795 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
SHANK3-201ENST00000262795 INO80BQ9C086 356 aaPredicted RBP17.56■□□□□ 0.4
SHANK3-201ENST00000262795 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 AOC3Q16853 763 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 FAM117BQ6P1L5 589 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 CCDC94Q9BW85 323 aaPredicted RBP17.56■□□□□ 0.4
SHANK3-201ENST00000262795 TRIM31Q9BZY9 425 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 OLA1Q9NTK5 396 aaKnown RBP17.56■□□□□ 0.4
SHANK3-201ENST00000262795 KCNQ3O43525 872 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 AK2P54819 239 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 TBX22Q9Y458 520 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 SLC16A2P36021 539 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 TMTC4Q5T4D3 741 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 KRT222Q8N1A0 295 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 ALKBH8Q96BT7 664 aaKnown RBP17.56■□□□□ 0.4
SHANK3-201ENST00000262795 SEC62Q99442 399 aaKnown RBP17.56■□□□□ 0.4
SHANK3-201ENST00000262795 HELLSQ9NRZ9 838 aa17.56■□□□□ 0.4
SHANK3-201ENST00000262795 ZNF804BA4D1E1 1349 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 TECP42680 631 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 IQUBQ8NA54 791 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
SHANK3-201ENST00000262795 PLEKHA4Q9H4M7 779 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 MCF2L2Q86YR7 1114 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 SLC7A5P2Q9GIP4 190 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 ZNF18P17022 549 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 NONOQ15233 471 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHANK3-201ENST00000262795 SMC6Q96SB8 1091 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 ITM2BQ9Y287 266 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 RNF217Q8TC41 542 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 FAM227BQ96M60 508 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 PLA2G4DQ86XP0 818 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 NAP1L3Q99457 506 aaPredicted RBP17.55■□□□□ 0.4
SHANK3-201ENST00000262795 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
SHANK3-201ENST00000262795 EHBP1Q8NDI1 1231 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 PALD1Q9ULE6 856 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 POTEB2H3BUK9 544 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 POMGNT1Q8WZA1 660 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 DACT1Q9NYF0 836 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 MTUS1Q9ULD2 1270 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 PIK3CAP42336 1068 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 SLC12A2P55011 1212 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 CNNM4Q6P4Q7 775 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 PI4K2BQ8TCG2 481 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 POLR2DO15514 142 aaKnown RBP17.54■□□□□ 0.4
SHANK3-201ENST00000262795 DEXIO95424 95 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 TMEM191BP0C7N4 346 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 HOXD10P28358 340 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 UBE2HP62256 183 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 PPARAQ07869 468 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 RUFY3Q7L099 469 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 SPDYE1Q8NFV5 336 aaPredicted RBP17.54■□□□□ 0.4
SHANK3-201ENST00000262795 CACNB3P54284 484 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 ELMOD1Q8N336 334 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 NRBP2Q9NSY0 501 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
SHANK3-201ENST00000262795 GSDMDP57764 484 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 CYP4A11Q02928 519 aa17.53■□□□□ 0.4
SHANK3-201ENST00000262795 CABP7Q86V35 215 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms