RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MXRA7P84157 204 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 MCF2L2Q86YR7 1114 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 SYCE1Q8N0S2 351 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 RGS12O14924 1447 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 MIER3Q7Z3K6 550 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 SDR42E1Q8WUS8 393 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 ZBTB16Q05516 673 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 TRIML1Q8N9V2 468 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 SMC6Q96SB8 1091 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 KLRF2D3W0D1 207 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 C8orf74Q6P047 294 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 PREX2Q70Z35 1606 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 NBPF11Q86T75 865 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 FAM204AQ9H8W3 233 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 PCDHB13Q9Y5F0 798 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 ZMYM1Q5SVZ6 1142 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 NEK8Q86SG6 692 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 MAP4K1Q92918 833 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 CCDC17Q96LX7 622 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 SEC62Q99442 399 aaKnown RBP21.05■□□□□ 0.96
PTPRE-201ENST00000254667 ASAP1Q9ULH1 1129 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 POLR2MP0CAP2 368 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 PFKFB1P16118 471 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 KLHL30Q0D2K2 578 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 SFMBT2Q5VUG0 894 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 ERBB3P21860 1342 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 TLDC2A0PJX2 215 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 YWHAEP62258 255 aaKnown RBP21.05■□□□□ 0.96
PTPRE-201ENST00000254667 MAEAQ7L5Y9 396 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 TPCN1Q9ULQ1 816 aa21.05■□□□□ 0.96
PTPRE-201ENST00000254667 CDK12Q9NYV4 1490 aaPredicted RBP21.04■□□□□ 0.96
PTPRE-201ENST00000254667 PABPC4Q13310 644 aaKnown RBP eCLIP21.04■□□□□ 0.96
PTPRE-201ENST00000254667 GOLGA5Q8TBA6 731 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 KIAA1468Q9P260 1216 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 M0QZ92 97 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 CMA1P23946 247 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 ZNF365Q70YC5 407 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 TPH2Q8IWU9 490 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 NELFCDQ8IXH7 590 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 ERVV-1B6SEH8 477 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 H0YCG3 227 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 ECM2O94769 699 aaPredicted RBP21.04■□□□□ 0.96
PTPRE-201ENST00000254667 ICA1Q05084 483 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 CTTNBP2NLQ9P2B4 639 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 OR52Z1P0C646 297 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 CAPN2P17655 700 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 PHKA1P46020 1223 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 FAM196AQ6ZSG2 479 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 CROCCP2Q86T23 111 aa21.04■□□□□ 0.96
PTPRE-201ENST00000254667 FBXO11Q86XK2 927 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 RAB3IL1Q8TBN0 382 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 SMCR8Q8TEV9 937 aaPredicted RBP21.03■□□□□ 0.96
PTPRE-201ENST00000254667 SWAP70Q9UH65 585 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 DBNLQ9UJU6 430 aaKnown RBP21.03■□□□□ 0.96
PTPRE-201ENST00000254667 PRKG1Q13976 671 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 TBC1D7Q9P0N9 293 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 ZBTB1Q9Y2K1 713 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 PROSER3Q2NL68 480 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 HACE1Q8IYU2 909 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 UBLCP1Q8WVY7 318 aaPredicted RBP21.03■□□□□ 0.96
PTPRE-201ENST00000254667 UTP11Q9Y3A2 253 aaKnown RBP21.03■□□□□ 0.96
PTPRE-201ENST00000254667 KIF1BO60333 1816 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 FOSP01100 380 aaPredicted RBP21.03■□□□□ 0.96
PTPRE-201ENST00000254667 KRT26Q7Z3Y9 468 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 FAM76AQ8TAV0 307 aa21.03■□□□□ 0.96
PTPRE-201ENST00000254667 STK10O94804 968 aaKnown RBP21.02■□□□□ 0.96
PTPRE-201ENST00000254667 MYOCDQ8IZQ8 938 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 LSG1Q9H089 658 aaKnown RBP21.02■□□□□ 0.96
PTPRE-201ENST00000254667 BLZF1Q9H2G9 400 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 PCDHA12Q9UN75 941 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 MTMR6Q9Y217 621 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 P4HA1P13674 534 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 CPLX4Q7Z7G2 160 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 TTC16Q8NEE8 873 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 NKIRAS1Q9NYS0 192 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 ATP2C2O75185 946 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 ADD1P35611 737 aaKnown RBP21.02■□□□□ 0.96
PTPRE-201ENST00000254667 KIAA0825Q8IV33 1275 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 EBAG9O00559 213 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 BBOX1O75936 387 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 CCDC121Q6ZUS5 278 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 GPBP1Q86WP2 473 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 IFT20Q8IY31 132 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 GABPB2Q8TAK5 448 aaPredicted RBP21.02■□□□□ 0.96
PTPRE-201ENST00000254667 RSPH14Q9UHP6 348 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 BCS1LQ9Y276 419 aa21.02■□□□□ 0.96
PTPRE-201ENST00000254667 PNOCQ13519 176 aa21.02■□□□□ 0.95
PTPRE-201ENST00000254667 ARHGEF16Q5VV41 709 aa21.02■□□□□ 0.95
PTPRE-201ENST00000254667 RNF34Q969K3 372 aa21.02■□□□□ 0.95
PTPRE-201ENST00000254667 VPS18Q9P253 973 aa21.02■□□□□ 0.95
PTPRE-201ENST00000254667 GINS2Q9Y248 185 aa21.02■□□□□ 0.95
PTPRE-201ENST00000254667 E7EVH7 732 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 PPEF1O14829 653 aaPredicted RBP21.01■□□□□ 0.95
PTPRE-201ENST00000254667 ZNF853P0CG23 659 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 USP28Q96RU2 1077 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 MAGEF1Q9HAY2 307 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 KCNK9Q9NPC2 374 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 PALD1Q9ULE6 856 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 DEPTORQ8TB45 409 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms