RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ASIC2Q16515 512 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 RUFY3Q7L099 469 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 NAP1L3Q99457 506 aaPredicted RBP15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 MKRN1Q9UHC7 482 aaKnown RBP15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 KDM3AQ9Y4C1 1321 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 KRT86O43790 486 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 TMEM191BP0C7N4 346 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 CCDC25Q86WR0 208 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 ANXA13P27216 316 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 POLR2BP30876 1174 aaKnown RBP15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 PLA2G4DQ86XP0 818 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 PPP2R3CQ969Q6 453 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 PHACTR3Q96KR7 559 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 TRIM7Q9C029 511 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 PIDD1Q9HB75 910 aa15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 SEPT9Q9UHD8 586 aaPredicted RBP15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 NUP153P49790 1475 aaKnown RBP15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 SNW1Q13573 536 aaKnown RBP15.9■□□□□ 0.14
ZC3H4-201ENST00000253048 BCRP11274 1271 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 RAD51AP2Q09MP3 1159 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 DMP1Q13316 513 aaPredicted RBP15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 GPR161Q8N6U8 529 aaKnown RBP15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 ATP7AQ04656 1500 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 NEO1Q92859 1461 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 LTKP29376 864 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 CEP128Q6ZU80 1094 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 NOL3O60936 208 aaKnown RBP15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 FASTKD5Q7L8L6 764 aaKnown RBP15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 NT5C3AQ9H0P0 336 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 SLFN12Q8IYM2 578 aa15.89■□□□□ 0.13
ZC3H4-201ENST00000253048 TSTA3Q13630 321 aaPredicted RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 TSPYL6Q8N831 410 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 TTC14Q96N46 770 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 FNDC3AQ9Y2H6 1198 aaKnown RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 PCDHA1Q9Y5I3 950 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 KCNQ4P56696 695 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 PDZD4Q76G19 769 aaPredicted RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 SLC12A2P55011 1212 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 HDAC1Q13547 482 aaPredicted RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 KRT81Q14533 505 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 CLUL1Q15846 466 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 DYMQ7RTS9 669 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 NACC1Q96RE7 527 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 UBXN2AP68543 259 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 RSRC2Q7L4I2 434 aaKnown RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 SKA2Q8WVK7 121 aaPredicted RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 ANKFY1Q9P2R3 1169 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 R3HDM1Q15032 1099 aaKnown RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 SPICE1Q8N0Z3 855 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 BBS5Q8N3I7 341 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 CCDC17Q96LX7 622 aa15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 CCDC94Q9BW85 323 aaPredicted RBP15.88■□□□□ 0.13
ZC3H4-201ENST00000253048 USP17L12C9JPN9 530 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 USP17L21D6R901 530 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 GNAT1P11488 350 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 TSGA10Q9BZW7 698 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 BLMP54132 1417 aaPredicted RBP15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 GOLGA8CPA6NN73 597 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 CABP7Q86V35 215 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 PCDHB13Q9Y5F0 798 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 IL6STP40189 918 aaPredicted RBP15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 CASC4Q6P4E1 433 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 RPUSD2Q8IZ73 545 aaKnown RBP15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 K7ENM7 598 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 MIGA2Q7L4E1 593 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 SLC12A6Q9UHW9 1150 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 AOPEPQ8N6M6 819 aa15.87■□□□□ 0.13
ZC3H4-201ENST00000253048 VAMP4O75379 141 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 TNNC1P63316 161 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 SCYL2Q6P3W7 929 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 UBL4BQ8N7F7 174 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 SNX25Q9H3E2 840 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 GDF11O95390 407 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 MIS12Q9H081 205 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 PPP2R5AQ15172 486 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 NELFCDQ8IXH7 590 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 ASAP1Q9ULH1 1129 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 SELENOSQ9BQE4 189 aa15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 LUC7L2Q9Y383 392 aaKnown RBP15.86■□□□□ 0.13
ZC3H4-201ENST00000253048 ATP6V0A1Q93050 837 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 ZSWIM4Q9H7M6 989 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 STAM2O75886 525 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 SATB1Q01826 763 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 APOBEC3FQ8IUX4 373 aaKnown RBP15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 ZNF365Q70YC5 407 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 CTAGE15A4D2H0 777 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 CTAGE8P0CG41 777 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 CTAGE6Q86UF2 777 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 CTAGE4Q8IX94 777 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 VPS52Q8N1B4 723 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 RDH13Q8NBN7 331 aa15.85■□□□□ 0.13
ZC3H4-201ENST00000253048 IL13P35225 146 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms