RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 GNL2Q13823 731 aaKnown RBP19.38■□□□□ 0.69
FOXA1-201ENST00000250448 AKNAD1Q5T1N1 836 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 MFSD6Q6ZSS7 791 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 NOL10Q9BSC4 688 aaKnown RBP19.38■□□□□ 0.69
FOXA1-201ENST00000250448 ZSWIM5Q9P217 1185 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 ATF5Q9Y2D1 282 aaPredicted RBP19.38■□□□□ 0.69
FOXA1-201ENST00000250448 USP17L12C9JPN9 530 aa19.37■□□□□ 0.69
FOXA1-201ENST00000250448 TMEM232C9JQI7 657 aa19.37■□□□□ 0.69
FOXA1-201ENST00000250448 USP17L21D6R901 530 aa19.37■□□□□ 0.69
FOXA1-201ENST00000250448 FANCGO15287 622 aa19.37■□□□□ 0.69
FOXA1-201ENST00000250448 GOLGA8FQ08AF8 430 aa19.37■□□□□ 0.69
FOXA1-201ENST00000250448 GOLGA8DPQ0D2H9 430 aa19.37■□□□□ 0.69
FOXA1-201ENST00000250448 SH3RF3Q8TEJ3 882 aaPredicted RBP19.37■□□□□ 0.69
FOXA1-201ENST00000250448 URI1O94763 535 aaPredicted RBP19.37■□□□□ 0.69
FOXA1-201ENST00000250448 METTL16Q86W50 562 aaKnown RBP19.37■□□□□ 0.69
FOXA1-201ENST00000250448 MAP3K14Q99558 947 aa19.37■□□□□ 0.69
FOXA1-201ENST00000250448 ZSCAN12O43309 604 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 ZRANB2O95218 330 aaKnown RBP eCLIP19.36■□□□□ 0.69
FOXA1-201ENST00000250448 TMCO3Q6UWJ1 677 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 G3V3G9 751 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 SH2B2O14492 632 aaPredicted RBP19.36■□□□□ 0.69
FOXA1-201ENST00000250448 PLA2G4AP47712 749 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 DCAF8Q5TAQ9 597 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 CTR9Q6PD62 1173 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 CLIC6Q96NY7 704 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 DCP1AQ9NPI6 582 aaPredicted RBP19.36■□□□□ 0.69
FOXA1-201ENST00000250448 FANCLQ9NW38 375 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 TMEM51Q9NW97 253 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 TAOK2Q9UL54 1235 aa19.36■□□□□ 0.69
FOXA1-201ENST00000250448 C21orf2O43822 256 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 CUTAO60888 179 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 STYK1Q6J9G0 422 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 CPLX2Q6PUV4 134 aaKnown RBP19.35■□□□□ 0.69
FOXA1-201ENST00000250448 TMEM139Q8IV31 216 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 MYL10Q9BUA6 226 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 CARD6Q9BX69 1037 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 CRNKL1Q9BZJ0 848 aaKnown RBP19.35■□□□□ 0.69
FOXA1-201ENST00000250448 ARHGAP6O43182 974 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 KRBA2Q6ZNG9 492 aa19.35■□□□□ 0.69
FOXA1-201ENST00000250448 VWA3AA6NCI4 1184 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 ERICH4A6NGS2 130 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 EFCAB8A8MWE9 144 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 USP17L8P0C7I0 530 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 CERS5Q8N5B7 392 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 PHKBQ93100 1093 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 INTS13Q9NVM9 706 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 PPP2R2CQ9Y2T4 447 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 MYH2Q9UKX2 1941 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 CHRM1P11229 460 aaPredicted RBP19.34■□□□□ 0.69
FOXA1-201ENST00000250448 PTPN21Q16825 1174 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 APOA5Q6Q788 366 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 CNNM3Q8NE01 707 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 COA1Q9GZY4 146 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 TPM1P09493 284 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 CDC27P30260 824 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 LONRF3Q496Y0 759 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 PCDHA5Q9Y5H7 936 aa19.34■□□□□ 0.69
FOXA1-201ENST00000250448 TGFBRAP1Q8WUH2 860 aa19.33■□□□□ 0.69
FOXA1-201ENST00000250448 STAG1Q8WVM7 1258 aa19.33■□□□□ 0.69
FOXA1-201ENST00000250448 KCNH3Q9ULD8 1083 aa19.33■□□□□ 0.69
FOXA1-201ENST00000250448 BTDP43251 543 aa19.33■□□□□ 0.68
FOXA1-201ENST00000250448 USP5P45974 858 aa19.33■□□□□ 0.68
FOXA1-201ENST00000250448 TMEM67Q5HYA8 995 aa19.33■□□□□ 0.68
FOXA1-201ENST00000250448 MICU3Q86XE3 530 aa19.33■□□□□ 0.68
FOXA1-201ENST00000250448 FOXP4Q8IVH2 680 aaPredicted RBP19.33■□□□□ 0.68
FOXA1-201ENST00000250448 CNKSR1Q969H4 720 aa19.33■□□□□ 0.68
FOXA1-201ENST00000250448 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.33■□□□□ 0.68
FOXA1-201ENST00000250448 MCM9Q9NXL9 1143 aa19.33■□□□□ 0.68
FOXA1-201ENST00000250448 PPP1R1BQ9UD71 204 aaPredicted RBP19.33■□□□□ 0.68
FOXA1-201ENST00000250448 QSER1Q2KHR3 1735 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 IFIT3O14879 490 aaKnown RBP19.32■□□□□ 0.68
FOXA1-201ENST00000250448 SCNN1DP51172 638 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 PDE4BQ07343 736 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 TBX2Q13207 712 aaPredicted RBP19.32■□□□□ 0.68
FOXA1-201ENST00000250448 TRIM29Q14134 588 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 CNPY4Q8N129 248 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 IGDCC4Q8TDY8 1250 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 RTFDC1Q9BY42 306 aaPredicted RBP19.32■□□□□ 0.68
FOXA1-201ENST00000250448 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
FOXA1-201ENST00000250448 MAST2Q6P0Q8 1798 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 DPEP1P16444 411 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 AOC3Q16853 763 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 NFXL1Q6ZNB6 911 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 MAPKAPK5Q8IW41 473 aa19.32■□□□□ 0.68
FOXA1-201ENST00000250448 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.32■□□□□ 0.68
FOXA1-201ENST00000250448 GOLGA6L9A6NEM1 432 aa19.31■□□□□ 0.68
FOXA1-201ENST00000250448 CYP2C19P33261 490 aa19.31■□□□□ 0.68
FOXA1-201ENST00000250448 ZBTB43O43298 467 aa19.31■□□□□ 0.68
FOXA1-201ENST00000250448 BMP6P22004 513 aa19.31■□□□□ 0.68
FOXA1-201ENST00000250448 IARSP41252 1262 aaKnown RBP19.31■□□□□ 0.68
FOXA1-201ENST00000250448 R3HDM1Q15032 1099 aaKnown RBP19.31■□□□□ 0.68
FOXA1-201ENST00000250448 FAM177A1Q8N128 213 aaPredicted RBP19.31■□□□□ 0.68
FOXA1-201ENST00000250448 C7orf43Q8WVR3 580 aa19.31■□□□□ 0.68
FOXA1-201ENST00000250448 BAG1Q99933 345 aaPredicted RBP19.31■□□□□ 0.68
FOXA1-201ENST00000250448 LY9Q9HBG7 655 aa19.31■□□□□ 0.68
FOXA1-201ENST00000250448 GOLGA8AA7E2F4 631 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 RANBP6O60518 1105 aaKnown RBP19.3■□□□□ 0.68
FOXA1-201ENST00000250448 GSTO1P78417 241 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 NTRK3Q16288 839 aa19.3■□□□□ 0.68
FOXA1-201ENST00000250448 KRT23Q9C075 422 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms