RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 LLPHQ9BRT6 129 aaKnown RBP14.65□□□□□ -0.06
COL1A1-201ENST00000225964 KLHL30Q0D2K2 578 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 TMCO4Q5TGY1 634 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 PABPC4Q13310 644 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL1A1-201ENST00000225964 DIXDC1Q155Q3 683 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 IFT20Q8IY31 132 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 SYCE1Q8N0S2 351 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 ARPP21Q9UBL0 812 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-201ENST00000225964 POLR3AO14802 1390 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-201ENST00000225964 KDM3AQ9Y4C1 1321 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 ATF7P17544 494 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-201ENST00000225964 EVCP57679 992 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 LGSNQ5TDP6 509 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 INTS4Q96HW7 963 aaKnown RBP14.64□□□□□ -0.07
COL1A1-201ENST00000225964 PSMB7Q99436 277 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 SNX14Q9Y5W7 946 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 PPARAQ07869 468 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 CTSWP56202 376 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 CCDC62Q6P9F0 684 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 ARHGEF2Q92974 986 aaKnown RBP14.64□□□□□ -0.07
COL1A1-201ENST00000225964 VPS37BQ9H9H4 285 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 SBNO1A3KN83 1393 aa14.64□□□□□ -0.07
COL1A1-201ENST00000225964 POSTNQ15063 836 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 REXO1Q8N1G1 1221 aaKnown RBP14.63□□□□□ -0.07
COL1A1-201ENST00000225964 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 NUF2Q9BZD4 464 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 PRAG1Q86YV5 1406 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 NLRP12P59046 1061 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 FANCCQ00597 558 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 NUP160Q12769 1436 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 SEPT6Q14141 434 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 GPBP1Q86WP2 473 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 AFAP1L1Q8TED9 768 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 RBSNQ9H1K0 784 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 RLBP1P12271 317 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 DCAF15Q66K64 600 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 CTTNBP2Q8WZ74 1663 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 POLR2MP0CAP2 368 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 MAP7Q14244 749 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 PRR16Q569H4 304 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 APOL6Q9BWW8 343 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 K7ENM7 598 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 XKR9Q5GH70 373 aa14.63□□□□□ -0.07
COL1A1-201ENST00000225964 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
COL1A1-201ENST00000225964 KDRP35968 1356 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 ADPGKQ9BRR6 497 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 GBP1P32455 592 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 STAMQ92783 540 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 KRT15P19012 456 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 KIF9Q9HAQ2 790 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 ZBTB40Q9NUA8 1239 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 ZKSCAN5Q9Y2L8 839 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 FLOT1O75955 427 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 TTC31Q49AM3 519 aaPredicted RBP14.62□□□□□ -0.07
COL1A1-201ENST00000225964 PEX26Q7Z412 305 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 CEP120Q8N960 986 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 SYNJ2BP-COX16A0A087WUM0 186 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 CERKLQ49MI3 558 aaPredicted RBP14.62□□□□□ -0.07
COL1A1-201ENST00000225964 RAB20Q9NX57 234 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 COX16Q9P0S2 106 aa14.62□□□□□ -0.07
COL1A1-201ENST00000225964 MRPL11Q9Y3B7 192 aaKnown RBP14.62□□□□□ -0.07
COL1A1-201ENST00000225964 ZNF202O95125 648 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 TYW1BQ6NUM6 668 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 SKA2Q8WVK7 121 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 SUGCTQ9HAC7 445 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 USP19O94966 1318 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 CASQ2O14958 399 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 TSTA3Q13630 321 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 CMTR1Q8N1G2 835 aaKnown RBP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 U2AF1L4Q8WU68 220 aaKnown RBP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 MCUR1Q96AQ8 359 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 WDR46O15213 610 aaKnown RBP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 TECP42680 631 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 KIAA0825Q8IV33 1275 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 NT5C3AQ9H0P0 336 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 ARHGEF10O15013 1369 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 LONRF2Q1L5Z9 754 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 PALM2Q8IXS6 379 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 SCYL1Q96KG9 808 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 PLEKHA4Q9H4M7 779 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 KCNG1Q9UIX4 513 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 THRAP3Q9Y2W1 955 aaKnown RBP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 SF3A3Q12874 501 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 CACNA2D3Q8IZS8 1091 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 RILPQ96NA2 401 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 VCX3BQ9H321 246 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 PSTPIP2Q9H939 334 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 ANKFY1Q9P2R3 1169 aa14.61□□□□□ -0.07
COL1A1-201ENST00000225964 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL1A1-201ENST00000225964 XRCC6P12956 609 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL1A1-201ENST00000225964 RPS6KA2Q15349 733 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 RRAGAQ7L523 313 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 RPS6KC1Q96S38 1066 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 TRIM56Q9BRZ2 755 aaKnown RBP14.6□□□□□ -0.07
COL1A1-201ENST00000225964 ATP2B4P23634 1241 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 POLGP54098 1239 aaPredicted RBP14.6□□□□□ -0.07
COL1A1-201ENST00000225964 KBTBD3Q8NAB2 608 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms