RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 ZC3H18Q86VM9 953 aaKnown RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 SESTD1Q86VW0 696 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 SIX5Q8N196 739 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 SEC63Q9UGP8 760 aaKnown RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 WDR97A6NE52 1622 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 TRIM66O15016 1216 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 ADCY3O60266 1144 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 GAS8O95995 478 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 ATL2Q8NHH9 583 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 GRAMD1AQ96CP6 724 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 ECE1P42892 770 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 TTC5Q8N0Z6 440 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 TBKBP1A7MCY6 615 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 CEP70Q8NHQ1 597 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.55□□□□□ -1.24e-7■□□□□ 11
RBM28-201ENST00000223073 SIKE1Q9BRV8 207 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 ZNF202O95125 648 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 AFAP1Q8N556 730 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 FMNL1O95466 1100 aaPredicted RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 ERCC5P28715 1186 aaPredicted RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 GGT6Q6P531 493 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 SH3GL2Q99962 352 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 SPAG7O75391 227 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 CASP14P31944 242 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 ARHGAP4P98171 946 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 CCDC88BA6NC98 1476 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 P4HA2O15460 535 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 KRT8P05787 483 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 MRPL28Q13084 256 aaKnown RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 FAM133BQ5BKY9 247 aaKnown RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
RBM28-201ENST00000223073 MIEF2Q96C03 454 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 EIF3HO15372 352 aaKnown RBP eCLIP7.55□□□□□ -1.26e-6■■■■□ 25.8
RBM28-201ENST00000223073 MLH1P40692 756 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 STRN3Q13033 797 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 ZBTB40Q9NUA8 1239 aa7.55□□□□□ -1.2
RBM28-201ENST00000223073 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 PABPN1LA6NDY0 278 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 TTLL7Q6ZT98 887 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 ENOX1Q8TC92 643 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 GNAT2P19087 354 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 LONP1P36776 959 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 STX3Q13277 289 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 MCF2P10911 925 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 SNX1Q13596 522 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 CCDC85AQ96PX6 553 aaPredicted RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 ITM2BQ9Y287 266 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 RPL13P26373 211 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 RCN1Q15293 331 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 C10orf76Q5T2E6 689 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 ANKRD35Q8N283 1001 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 CARD8Q9Y2G2 431 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 TRIM75PA6NK02 468 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 CUTAO60888 179 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 DDI1Q8WTU0 396 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 CTNND1O60716 968 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 KRT6AP02538 564 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 KRT6BP04259 564 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 KRT6CP48668 564 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 TEDDM1Q5T9Z0 273 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 PACSIN2Q9UNF0 486 aaPredicted RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 HSPA1LP34931 641 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 BZW2Q9Y6E2 419 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 GNA14O95837 355 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 AP2B1P63010 937 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 DISC1Q9NRI5 854 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 CAMSAP2Q08AD1 1489 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 FGD6Q6ZV73 1430 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 SCYL3Q8IZE3 742 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 TSR2Q969E8 191 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 KCNH3Q9ULD8 1083 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 PYCARDQ9ULZ3 195 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 XPOTO43592 962 aaKnown RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 AP1G2O75843 785 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 MTX1Q13505 466 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 TMTC3Q6ZXV5 915 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 A0A1W2PQ27 194 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 A0A1W2PQ64 194 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 A0A1W2PQD8 194 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 ATP1A2P50993 1020 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 NR1H4Q96RI1 486 aaPredicted RBP7.54□□□□□ -1.2
RBM28-201ENST00000223073 ABCB6Q9NP58 842 aa7.54□□□□□ -1.2
RBM28-201ENST00000223073 AHCYL1O43865 530 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 RAP1GDS1P52306 607 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 HDAC4P56524 1084 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 TMEM110Q86TL2 294 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 PBKQ96KB5 322 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 NUDCD1Q96RS6 583 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 DNAJC17Q9NVM6 304 aaKnown RBP7.53□□□□□ -1.2
RBM28-201ENST00000223073 PPIP5K2O43314 1243 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 CHRM1P11229 460 aaPredicted RBP7.53□□□□□ -1.2
RBM28-201ENST00000223073 RILPL1Q5EBL4 403 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 ANO5Q75V66 913 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.53□□□□□ -1.2
RBM28-201ENST00000223073 OATP04181 439 aa7.53□□□□□ -1.2
RBM28-201ENST00000223073 IARSP41252 1262 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms