RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 INPP5BP32019 993 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 PPP2R5CQ13362 524 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 ARHGEF2Q92974 986 aaKnown RBP19.76■□□□□ 0.75
EXTL3-201ENST00000220562 DNM2P50570 870 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 SF3A3Q12874 501 aaKnown RBP eCLIP19.76■□□□□ 0.75
EXTL3-201ENST00000220562 CACNA2D3Q8IZS8 1091 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 UBE2Q2Q8WVN8 375 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 BUB1BO60566 1050 aaPredicted RBP19.76■□□□□ 0.75
EXTL3-201ENST00000220562 PFKFB1P16118 471 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 FAM98CQ17RN3 349 aaKnown RBP19.76■□□□□ 0.75
EXTL3-201ENST00000220562 ZSCAN10Q96SZ4 725 aaPredicted RBP19.76■□□□□ 0.75
EXTL3-201ENST00000220562 SND1Q7KZF4 910 aaKnown RBP eCLIP19.76■□□□□ 0.75
EXTL3-201ENST00000220562 C2CD5Q86YS7 1000 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 AFAP1L2Q8N4X5 818 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 CCDC89Q8N998 374 aa19.76■□□□□ 0.75
EXTL3-201ENST00000220562 DNMT1P26358 1616 aaKnown RBP19.75■□□□□ 0.75
EXTL3-201ENST00000220562 KCNJ18B7U540 433 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 OAS2P29728 719 aaKnown RBP19.75■□□□□ 0.75
EXTL3-201ENST00000220562 KCNJ12Q14500 433 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 ZNF654Q8IZM8 581 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 GNA14O95837 355 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 MTMR3Q13615 1198 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 CCDC62Q6P9F0 684 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 SEPT14Q6ZU15 432 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 U2AF1L4Q8WU68 220 aaKnown RBP19.75■□□□□ 0.75
EXTL3-201ENST00000220562 KDM3AQ9Y4C1 1321 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 EPSTI1Q96J88 318 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 TNNI1P19237 187 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 PCK1P35558 622 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 FAM102BQ5T8I3 360 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 USP40Q9NVE5 1235 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 TBX22Q9Y458 520 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 MORC3Q14149 939 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 SDCCAG8Q86SQ7 713 aaPredicted RBP19.75■□□□□ 0.75
EXTL3-201ENST00000220562 GPBP1Q86WP2 473 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 MCUR1Q96AQ8 359 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 NT5C3AQ9H0P0 336 aa19.75■□□□□ 0.75
EXTL3-201ENST00000220562 I3L4J1 428 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 SUPT20HQ8NEM7 779 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 GABPB2Q8TAK5 448 aaPredicted RBP19.74■□□□□ 0.75
EXTL3-201ENST00000220562 VPS37BQ9H9H4 285 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.74■□□□□ 0.75
EXTL3-201ENST00000220562 TECP42680 631 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 PCDHB13Q9Y5F0 798 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 KRT15P19012 456 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 CYP2J2P51589 502 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 PTH1RQ03431 593 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 DENND2CQ68D51 928 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 DDX17Q92841 729 aaKnown RBP19.74■□□□□ 0.75
EXTL3-201ENST00000220562 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 CROCCP2Q86T23 111 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 NUCKS1Q9H1E3 243 aaKnown RBP19.74■□□□□ 0.75
EXTL3-201ENST00000220562 PZPP20742 1482 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 MIER3Q7Z3K6 550 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 KDRP35968 1356 aa19.74■□□□□ 0.75
EXTL3-201ENST00000220562 SMAP1Q8IYB5 467 aaPredicted RBP19.73■□□□□ 0.75
EXTL3-201ENST00000220562 MGARPQ8TDB4 240 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 KAT6BQ8WYB5 2073 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 ADALQ6DHV7 355 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 CCDC84Q86UT8 332 aaPredicted RBP19.73■□□□□ 0.75
EXTL3-201ENST00000220562 VSIG1Q86XK7 387 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 NACA2Q9H009 215 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 GAS7O60861 476 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 ZNF496Q96IT1 587 aaPredicted RBP19.73■□□□□ 0.75
EXTL3-201ENST00000220562 TMEM63CQ9P1W3 806 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 TTLL3Q9Y4R7 772 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 NR1I2O75469 434 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 A0A0D9SFI3 127 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 SORBS3O60504 671 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 AMFRQ9UKV5 643 aa19.73■□□□□ 0.75
EXTL3-201ENST00000220562 ZMYM6O95789 1325 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 MYSM1Q5VVJ2 828 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 HOOK2Q96ED9 719 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 OTUD6AQ7L8S5 288 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 CARD10Q9BWT7 1032 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 GSPT1P15170 499 aaKnown RBP19.72■□□□□ 0.75
EXTL3-201ENST00000220562 LGSNQ5TDP6 509 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 ZNF274Q96GC6 653 aaPredicted RBP19.72■□□□□ 0.75
EXTL3-201ENST00000220562 A6NNZ2 444 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 GIPC1O14908 333 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 TUBB8Q3ZCM7 444 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 NSMCE1Q8WV22 266 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 PLXNC1O60486 1568 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 BRD1O95696 1058 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 PSMD6Q15008 389 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 BLIDQ8IZY5 108 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 MAIP1Q8WWC4 291 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 GDAP1L1Q96MZ0 367 aa19.72■□□□□ 0.75
EXTL3-201ENST00000220562 GUCY2FP51841 1108 aa19.71■□□□□ 0.75
EXTL3-201ENST00000220562 LMNTD2Q8IXW0 634 aa19.71■□□□□ 0.75
EXTL3-201ENST00000220562 IFNL3Q8IZI9 196 aa19.71■□□□□ 0.75
EXTL3-201ENST00000220562 TM6SF1Q9BZW5 370 aa19.71■□□□□ 0.75
EXTL3-201ENST00000220562 NPC1L1Q9UHC9 1359 aa19.71■□□□□ 0.75
EXTL3-201ENST00000220562 KDM5AP29375 1690 aaKnown RBP19.71■□□□□ 0.75
EXTL3-201ENST00000220562 NOSTRINQ8IVI9 506 aa19.71■□□□□ 0.75
EXTL3-201ENST00000220562 BLMP54132 1417 aaPredicted RBP19.71■□□□□ 0.75
EXTL3-201ENST00000220562 ABCB4P21439 1286 aa19.71■□□□□ 0.75
EXTL3-201ENST00000220562 GTF2IP78347 998 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms