RNA–Protein interactions for RNA: ENSMUST00000193792.5

Sec61a2-209, Transcript of Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

TSL 1 (best) BASIC

Gene Sec61a2, Length 2,110 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2-209ENSMUST00000193792 Podnl1Q6P3Y9 559 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 DnerQ8JZM4 737 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Rnf123Q5XPI3 1314 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Znf638Q61464 1960 aaKnown RBP17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Prr16A3KMN5 304 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Trim5E9PV98 497 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 OgdhlE9Q7L0 1029 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Lipo1J3QME6 396 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 DaxxO35613 739 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Nmt2O70311 529 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 GabpaQ00422 454 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Senp7Q8BUH8 1037 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Jakmip1Q8BVL9 626 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Pus7lQ8CE46 702 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 C1qtnf12Q8R2Z0 308 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 HlcsQ920N2 722 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Arih1Q9Z1K5 555 aa17.14■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Celf5D3Z4T1 395 aaKnown RBP17.13■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Nf2P46662 596 aa17.13■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ppip5k2Q6ZQB6 1129 aa17.13■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 H2-Q4Q8HWB2 354 aa17.13■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Dock2Q8C3J5 1828 aa17.13■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ldlrad1D3YYZ1 218 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Foxd1Q61345 456 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Haus6Q6NV99 933 aaKnown RBP17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Tcp11l1Q8BTG3 509 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Fsd2Q8BZ52 692 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ccdc158Q8CDI6 1109 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 LdhaP06151 332 aaKnown RBP17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Tph1P17532 447 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Mtx1P47802 317 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Psmc4P54775 418 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Il6stQ00560 917 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Terb1Q8C0V1 768 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 ArcQ9WV31 396 aa17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Psma5Q9Z2U1 241 aaKnown RBP17.12■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gm15262A0A140LIQ5 728 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ripor3A1L3T7 938 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Stx8O88983 236 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ms4a2P20490 235 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Sec23aQ01405 765 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 4930567H17RikQ3V0K5 233 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Lca5Q80ST9 704 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Siglec10Q80ZE3 688 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Hps6Q8BLY7 805 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Cep55Q8BT07 462 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Kcnc4Q8R1C0 628 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Mad2l2Q9D752 211 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Sapcd2Q9D818 391 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 WtapQ9ER69 396 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gm29094F6Q785 221 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Btg1-ps1Q3V0S2 161 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Btg1-ps2Q3V0X0 161 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gm10392Q3V3I3 114 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ccdc84Q4VA36 332 aaKnown RBP17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Nr3c2Q8VII8 978 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Bco2Q99NF1 532 aa17.11■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Slc4a3P16283 1227 aa17.1■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Tmtc2Q56A06 836 aa17.1■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gprasp2Q8BUY8 826 aa17.1■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ccdc178Q8CDV0 866 aa17.1■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 DaglbQ91WC9 669 aa17.1■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Tjp3Q9QXY1 905 aa17.1■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Rabgap1A2AWA9 1064 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gjd2O54851 321 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Traf3ip1Q149C2 625 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Bclaf1Q8K019 919 aaKnown RBP17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Sh2b2Q9JID9 621 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ccdc88aQ5SNZ0 1873 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Pde6aP27664 859 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Igfbp4P47879 254 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gm21985Q6P6P5 1106 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Wdr43Q6ZQL4 677 aaKnown RBP17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Sgsm2Q80U12 1005 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Ncaph2Q8BSP2 607 aa17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Atp5c1Q91VR2 298 aaKnown RBP17.09■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Fam71e1A1L3C1 212 aa17.08■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gml2G5E8L7 176 aa17.08■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Gjb1P28230 283 aa17.08■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Atp11aP98197 1187 aa17.08■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Morc2bQ8C5W4 1022 aa17.08■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Arhgef25Q9CWR0 618 aa17.08■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Clstn1Q9EPL2 979 aa17.08■□□□□ 0.33
Sec61a2-209ENSMUST00000193792 Usp34Q6ZQ93 3582 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Trim30dE9PWL0 497 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Parp2O88554 559 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Calm1P0DP26 149 aaKnown RBP17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Calm2P0DP27 149 aaKnown RBP17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Calm3P0DP28 149 aaKnown RBP17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 OatP29758 439 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Atp13a3Q5XF89 1219 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Prdm1Q60636 856 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Ivns1abpQ920Q8 642 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Ccdc47Q9D024 483 aaKnown RBP17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 PdhbQ9D051 359 aa17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 PfkpQ9WUA3 784 aaKnown RBP17.08■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 TicrrQ8BQ33 1889 aa17.07■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Copb2O55029 905 aa17.07■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Myl3P09542 204 aa17.07■□□□□ 0.32
Sec61a2-209ENSMUST00000193792 Anapc15P60007 132 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms