RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Tmx1Q8VBT0 278 aa15.05■□□□□ 0
Prpf38b-201ENSMUST00000029480 Dbndd1Q9CZ00 160 aa15.05■□□□□ 0
Prpf38b-201ENSMUST00000029480 Zscan20B2KFW1 1030 aa15.05■□□□□ -0
Prpf38b-201ENSMUST00000029480 Kif23E9Q5G3 953 aa15.05■□□□□ -0
Prpf38b-201ENSMUST00000029480 Kif3cO35066 796 aa15.05■□□□□ -0
Prpf38b-201ENSMUST00000029480 Slc27a1Q60714 646 aa15.05■□□□□ -0
Prpf38b-201ENSMUST00000029480 Peak1Q69Z38 1735 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Trim55G3X8Y1 545 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Rad23bP54728 416 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Nub1P54729 614 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Tlr8P58682 1032 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Ppp4cP97470 307 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Ufl1Q8CCJ3 793 aaKnown RBP15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Ccdc73Q8CDM4 1066 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Nat10Q8K224 1024 aaKnown RBP15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Cfap45Q9D9U9 551 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Arl6ip4Q9JM93 229 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Serpina16D3Z660 418 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Pola2P33611 600 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Tspan18Q80WR1 248 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Spata16Q8C636 571 aa15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Mta1Q8K4B0 715 aaKnown RBP15.04■□□□□ -0
Prpf38b-201ENSMUST00000029480 Slc4a4O88343 1079 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Krt18P05784 423 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Haus7Q8BKT8 364 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Tmem143Q8VD26 458 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Mcm6P97311 821 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Rtel1Q0VGM9 1203 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 LrmpQ60664 539 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Rasa3Q60790 834 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Stap2Q8R0L1 411 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 CpzQ8R4V4 654 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Gja10Q9WUS4 505 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 CrcpO35427 148 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 NefhP19246 1090 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 H2afxP27661 143 aaKnown RBP15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Adssl1P28650 457 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Vil1Q62468 827 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Etf1Q8BWY3 437 aaKnown RBP15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Fermt2Q8CIB5 680 aa15.03■□□□□ -0
Prpf38b-201ENSMUST00000029480 Flt1P35969 1333 aa15.02■□□□□ -0
Prpf38b-201ENSMUST00000029480 EmbP21995 330 aa15.02■□□□□ -0
Prpf38b-201ENSMUST00000029480 Sval3Q76I99 144 aa15.02■□□□□ -0
Prpf38b-201ENSMUST00000029480 QarsQ8BML9 775 aa15.02■□□□□ -0
Prpf38b-201ENSMUST00000029480 Q9D1Z2 194 aa15.02■□□□□ -0
Prpf38b-201ENSMUST00000029480 UvssaQ9D479 717 aa15.02■□□□□ -0
Prpf38b-201ENSMUST00000029480 IncenpQ9WU62 880 aa15.02■□□□□ -0
Prpf38b-201ENSMUST00000029480 GclcP97494 637 aa15.02□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Specc1lQ2KN98 1118 aaKnown RBP15.02□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Pla2g4fQ50L41 855 aa15.02□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Tob2Q9JM55 345 aa15.02□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Pcdh11xF6ZNL5 1338 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Cul4bA2A432 970 aaKnown RBP15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Znf568E9PYI1 671 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Scg2Q03517 617 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Gcnt1Q09324 428 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Agtpbp1Q641K1 1218 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 McamQ8R2Y2 648 aaKnown RBP15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Mtmr6Q8VE11 617 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Golga5Q9QYE6 729 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Megf6Q80V70 1572 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Api5O35841 504 aaKnown RBP15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 PparaP23204 468 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Dnm1P39053 867 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Atp8b1Q148W0 1251 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Ehmt1Q5DW34 1296 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 1810065E05RikQ5NC41 235 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Ehd2Q8BH64 543 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Ces1dQ8VCT4 565 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Znf287Q9EQB9 759 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Sh3tc1G3X9F6 1346 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Pfkfb3A7UAK5 555 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Spg7Q3ULF4 781 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Gucy2cQ3UWA6 1072 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 ErfeQ6PGN1 340 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Strip1Q8C079 837 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Sh3bp5lQ99LH9 392 aa15.01□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Ulk4Q3V129 1303 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Col4a5Q63ZW6 1691 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Pip4k2aO70172 405 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Gtpbp10Q8K013 366 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Phldb2Q8K1N2 1249 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 GzmnQ920S1 248 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Syce1Q9D495 329 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Psg29Q3URN6 468 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 L1td1Q587J6 782 aaKnown RBP15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Sh3gl3Q62421 347 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Acnat2Q8BGG9 420 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Snrnp27Q8K194 155 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Col23a1Q8K4G2 532 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Tomm22Q9CPQ3 142 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 CenpqQ9CPQ5 267 aa15□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 4932429P05RikA2ADI4 785 aa14.99□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Gm5624F6ZZG8 207 aa14.99□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Cdr2P97817 455 aa14.99□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Smyd5Q3TYX3 416 aa14.99□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Cyp24a1Q64441 514 aa14.99□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Iqcb1Q8BP00 598 aa14.99□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 DymQ8CHY3 669 aa14.99□□□□□ -0.01
Prpf38b-201ENSMUST00000029480 Trim29Q8R2Q0 587 aa14.99□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms