RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W CYM1P32898 989 aa1.82□□□□□ -2.12
CTF4YPR135W YEL1P34225 687 aa1.82□□□□□ -2.12
CTF4YPR135W TCD2P36101 447 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W BIT2P38346 545 aa1.82□□□□□ -2.12
CTF4YPR135W VPS8P39702 1274 aa1.82□□□□□ -2.12
CTF4YPR135W HMF1P40037 129 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W TOK1P40310 691 aa1.82□□□□□ -2.12
CTF4YPR135W GZF3P42944 551 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W CAF16P43569 289 aa1.82□□□□□ -2.12
CTF4YPR135W RPS0BP46654 252 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W ALY2P47029 1046 aa1.82□□□□□ -2.12
CTF4YPR135W LIF1P53150 421 aa1.82□□□□□ -2.12
CTF4YPR135W GTR1Q00582 310 aa1.82□□□□□ -2.12
CTF4YPR135W RSC3Q06639 885 aa1.82□□□□□ -2.12
CTF4YPR135W RTT109Q07794 436 aa1.82□□□□□ -2.12
CTF4YPR135W NEW1Q08972 1196 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W YTM1Q12024 460 aaPredicted RBP1.82□□□□□ -2.12
CTF4YPR135W SPE3Q12074 293 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W YIL046W-AQ3E7Z4 54 aa1.82□□□□□ -2.12
CTF4YPR135W BRR2P32639 2163 aaKnown RBP1.82□□□□□ -2.12
CTF4YPR135W DIF1O13577 133 aa1.81□□□□□ -2.12
CTF4YPR135W GFD2P25370 566 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W SWI3P32591 825 aa1.81□□□□□ -2.12
CTF4YPR135W PTH2P34222 208 aa1.81□□□□□ -2.12
CTF4YPR135W HMT1P38074 348 aa1.81□□□□□ -2.12
CTF4YPR135W WSC4P38739 605 aa1.81□□□□□ -2.12
CTF4YPR135W NDT80P38830 627 aa1.81□□□□□ -2.12
CTF4YPR135W CCT5P40413 562 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W TEL2P53038 688 aa1.81□□□□□ -2.12
CTF4YPR135W YGR283CP53336 341 aaPredicted RBP1.81□□□□□ -2.12
CTF4YPR135W HOL1P53389 586 aa1.81□□□□□ -2.12
CTF4YPR135W EIS1Q05050 843 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W SUE1Q06524 206 aa1.81□□□□□ -2.12
CTF4YPR135W GRC3Q07845 632 aa1.81□□□□□ -2.12
CTF4YPR135W PSR2Q07949 397 aa1.81□□□□□ -2.12
CTF4YPR135W PLP2Q12017 286 aa1.81□□□□□ -2.12
CTF4YPR135W MET8P15807 274 aa1.81□□□□□ -2.12
CTF4YPR135W SAN1P22470 610 aa1.81□□□□□ -2.12
CTF4YPR135W TVP38P36164 337 aa1.81□□□□□ -2.12
CTF4YPR135W PCA1P38360 1216 aa1.81□□□□□ -2.12
CTF4YPR135W BCD1P38772 366 aa1.81□□□□□ -2.12
CTF4YPR135W SET5P38890 526 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W RTS1P38903 757 aa1.81□□□□□ -2.12
CTF4YPR135W FMP52P40008 231 aa1.81□□□□□ -2.12
CTF4YPR135W RMD8P43620 662 aa1.81□□□□□ -2.12
CTF4YPR135W MNN11P46985 422 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W SRB7P47822 140 aa1.81□□□□□ -2.12
CTF4YPR135W YAP1802P53309 568 aa1.81□□□□□ -2.12
CTF4YPR135W YNL134CP53912 376 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W SMX3P54999 86 aaPredicted RBP1.81□□□□□ -2.12
CTF4YPR135W TAF3Q12297 353 aa1.81□□□□□ -2.12
CTF4YPR135W CLF1Q12309 687 aaPredicted RBP1.81□□□□□ -2.12
CTF4YPR135W YOL114CQ12322 202 aa1.81□□□□□ -2.12
CTF4YPR135W SUL2Q12325 893 aa1.81□□□□□ -2.12
CTF4YPR135W NAT1P12945 854 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W COX11P19516 300 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W SIR1P21691 654 aa1.81□□□□□ -2.12
CTF4YPR135W ATP12P22135 325 aa1.81□□□□□ -2.12
CTF4YPR135W PET127P32606 800 aa1.81□□□□□ -2.12
CTF4YPR135W MUD2P36084 527 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W DUG2P38149 878 aa1.81□□□□□ -2.12
CTF4YPR135W FAT1P38225 669 aa1.81□□□□□ -2.12
CTF4YPR135W MED6P38782 295 aa1.81□□□□□ -2.12
CTF4YPR135W VPS45P38932 577 aa1.81□□□□□ -2.12
CTF4YPR135W YEL020CP39994 560 aa1.81□□□□□ -2.12
CTF4YPR135W HXT16P47185 567 aa1.81□□□□□ -2.12
CTF4YPR135W ALT2P52892 507 aa1.81□□□□□ -2.12
CTF4YPR135W ARC35P53731 342 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W SLG1P54867 378 aa1.81□□□□□ -2.12
CTF4YPR135W MUS81Q04149 632 aaPredicted RBP1.81□□□□□ -2.12
CTF4YPR135W ARA2Q04212 335 aa1.81□□□□□ -2.12
CTF4YPR135W TFC6Q06339 672 aa1.81□□□□□ -2.12
CTF4YPR135W RPS21BQ3E754 87 aaKnown RBP1.81□□□□□ -2.12
CTF4YPR135W GAL4P04386 881 aa1.8□□□□□ -2.12
CTF4YPR135W LAT1P12695 482 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W CCR4P31384 837 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W HOG1P32485 435 aa1.8□□□□□ -2.12
CTF4YPR135W VPH1P32563 840 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W DHR2P36009 735 aaPredicted RBP1.8□□□□□ -2.12
CTF4YPR135W MIA40P36046 403 aa1.8□□□□□ -2.12
CTF4YPR135W MUM2P38236 366 aa1.8□□□□□ -2.12
CTF4YPR135W SAK1P38990 1142 aa1.8□□□□□ -2.12
CTF4YPR135W CHS6P40955 746 aa1.8□□□□□ -2.12
CTF4YPR135W NMA2P53204 395 aa1.8□□□□□ -2.12
CTF4YPR135W YGR250CP53316 781 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W ATP25Q03153 612 aa1.8□□□□□ -2.12
CTF4YPR135W ENV7Q12003 364 aa1.8□□□□□ -2.12
CTF4YPR135W TGL5Q12043 749 aa1.8□□□□□ -2.12
CTF4YPR135W PKH2Q12236 1081 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W RMP1Q12530 201 aa1.8□□□□□ -2.12
CTF4YPR135W CSF1Q12150 2958 aa1.8□□□□□ -2.12
CTF4YPR135W HAP2P06774 265 aa1.8□□□□□ -2.12
CTF4YPR135W NUC1P08466 329 aa1.8□□□□□ -2.12
CTF4YPR135W SPO16P17122 198 aa1.8□□□□□ -2.12
CTF4YPR135W TPM1P17536 199 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W AAC3P18238 307 aa1.8□□□□□ -2.12
CTF4YPR135W GPI10P30777 616 aa1.8□□□□□ -2.12
CTF4YPR135W CSE2P33308 149 aa1.8□□□□□ -2.12
CTF4YPR135W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
CTF4YPR135W NUP120P35729 1037 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms