RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	LTP1	P40347	161 aa		6.26	□□□□□ -1.41
SKG1	YKR100C	AZR1	P50080	613 aa		6.26	□□□□□ -1.41
SKG1	YKR100C	DOS2	P54858	310 aa		6.26	□□□□□ -1.41
SKG1	YKR100C	SUP35	P05453	685 aa	Known RBP	6.25	□□□□□ -1.41
SKG1	YKR100C	YJL193W	P39542	402 aa		6.25	□□□□□ -1.41
SKG1	YKR100C	GLO1	P50107	326 aa		6.25	□□□□□ -1.41
SKG1	YKR100C	PNG1	Q02890	363 aa		6.25	□□□□□ -1.41
SKG1	YKR100C	USA1	Q03714	838 aa		6.25	□□□□□ -1.41
SKG1	YKR100C	TGS1	Q12052	315 aa		6.25	□□□□□ -1.41
SKG1	YKR100C	TUF1	P02992	437 aa	Known RBP	6.24	□□□□□ -1.41
SKG1	YKR100C	RPP0	P05317	312 aa	Known RBP	6.24	□□□□□ -1.41
SKG1	YKR100C	VPS33	P20795	691 aa		6.24	□□□□□ -1.41
SKG1	YKR100C	PTP1	P25044	335 aa		6.24	□□□□□ -1.41
SKG1	YKR100C	LOT5	P34234	306 aa		6.24	□□□□□ -1.41
SKG1	YKR100C	SAP4	P53036	818 aa		6.24	□□□□□ -1.41
SKG1	YKR100C	PEF1	P53238	335 aa		6.24	□□□□□ -1.41
SKG1	YKR100C	MMR1	Q06324	491 aa		6.24	□□□□□ -1.41
SKG1	YKR100C	AQY1	P0CD91	305 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	YEL076C-A	P0CX16	216 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	YLR464W	P0CX17	216 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	RNR3	P21672	869 aa	Known RBP	6.23	□□□□□ -1.41
SKG1	YKR100C	TMT1	P32643	299 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	CCL1	P37366	393 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	YPT10	P38146	199 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	BRN1	P38170	754 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	SRP68	P38687	599 aa	Known RBP	6.23	□□□□□ -1.41
SKG1	YKR100C	YEL076C	P39971	216 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	MOB1	P40484	314 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	IRC5	P43610	853 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	YAP7	Q08182	245 aa		6.23	□□□□□ -1.41
SKG1	YKR100C	MEX67	Q99257	599 aa	Known RBP	6.23	□□□□□ -1.41
SKG1	YKR100C	PCK1	P10963	549 aa		6.22	□□□□□ -1.41
SKG1	YKR100C	YFL015C	P43578	164 aa		6.22	□□□□□ -1.41
SKG1	YKR100C	ATG36	P46983	293 aa		6.22	□□□□□ -1.41
SKG1	YKR100C	NIT2	P47016	307 aa		6.22	□□□□□ -1.41
SKG1	YKR100C	SCS3	P53012	380 aa		6.22	□□□□□ -1.41
SKG1	YKR100C	YGL081W	P53156	320 aa		6.22	□□□□□ -1.41
SKG1	YKR100C	AEP2	P22136	580 aa		6.21	□□□□□ -1.42
SKG1	YKR100C	YEN1	P40028	759 aa		6.21	□□□□□ -1.42
SKG1	YKR100C	MPP10	P47083	593 aa	Known RBP	6.21	□□□□□ -1.42
SKG1	YKR100C	YAT1	P80235	687 aa		6.21	□□□□□ -1.42
SKG1	YKR100C	YML037C	Q03703	340 aa		6.21	□□□□□ -1.42
SKG1	YKR100C	RPC34	P32910	317 aa		6.2	□□□□□ -1.42
SKG1	YKR100C	TVP23	P38962	199 aa		6.2	□□□□□ -1.42
SKG1	YKR100C	YFH7	P43591	353 aa		6.2	□□□□□ -1.42
SKG1	YKR100C	YJL043W	P47053	257 aa		6.2	□□□□□ -1.42
SKG1	YKR100C	GFD1	Q04839	188 aa	Known RBP	6.2	□□□□□ -1.42
SKG1	YKR100C	YOR378W	Q08902	515 aa		6.2	□□□□□ -1.42
SKG1	YKR100C	FRE7	Q12333	620 aa		6.2	□□□□□ -1.42
SKG1	YKR100C	RRD2	Q12461	358 aa		6.2	□□□□□ -1.42
SKG1	YKR100C	SNA3	P14359	133 aa		6.19	□□□□□ -1.42
SKG1	YKR100C	EXO1	P39875	702 aa		6.19	□□□□□ -1.42
SKG1	YKR100C	OPT1	P40897	799 aa		6.19	□□□□□ -1.42
SKG1	YKR100C	ATP23	P53722	227 aa		6.19	□□□□□ -1.42
SKG1	YKR100C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
SKG1	YKR100C	CWC2	Q12046	339 aa	Predicted RBP	6.19	□□□□□ -1.42
SKG1	YKR100C	YLR422W	Q06409	1932 aa		6.19	□□□□□ -1.42
SKG1	YKR100C	LAA1	P39526	2014 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	KRS1	P15180	591 aa	Known RBP	6.18	□□□□□ -1.42
SKG1	YKR100C	DSS4	P32601	143 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	RPT3	P33298	428 aa	Known RBP	6.18	□□□□□ -1.42
SKG1	YKR100C	EAF5	P39995	279 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	ALD5	P40047	520 aa	Known RBP	6.18	□□□□□ -1.42
SKG1	YKR100C	ULP2	P40537	1034 aa	Predicted RBP	6.18	□□□□□ -1.42
SKG1	YKR100C	GAT1	P43574	510 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	SPC105	P53148	917 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	ORM2	Q06144	216 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	PCL8	Q08966	492 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	VPS5	Q92331	675 aa		6.18	□□□□□ -1.42
SKG1	YKR100C	SNF1	P06782	633 aa	Known RBP	6.17	□□□□□ -1.42
SKG1	YKR100C	APE1	P14904	514 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	COX11	P19516	300 aa	Known RBP	6.17	□□□□□ -1.42
SKG1	YKR100C	CWH43	P25618	953 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	MRPL9	P31334	269 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	LEU5	P38702	357 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	ZAP1	P47043	880 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	MDR1	P53258	950 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	SEC5	P89102	971 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	MTD1	Q02046	320 aa	Known RBP	6.17	□□□□□ -1.42
SKG1	YKR100C	WAR1	Q03631	944 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	TRE2	Q08693	809 aa		6.17	□□□□□ -1.42
SKG1	YKR100C	SEC12	P11655	471 aa		6.16	□□□□□ -1.42
SKG1	YKR100C	UTR4	P32626	227 aa		6.16	□□□□□ -1.42
SKG1	YKR100C	MNT2	P53059	558 aa		6.16	□□□□□ -1.42
SKG1	YKR100C	CSL4	P53859	292 aa	Predicted RBP	6.16	□□□□□ -1.42
SKG1	YKR100C	YPK1	P12688	680 aa	Known RBP	6.15	□□□□□ -1.42
SKG1	YKR100C	ECM32	P32644	1121 aa	Known RBP	6.15	□□□□□ -1.42
SKG1	YKR100C	BEM3	P32873	1128 aa		6.15	□□□□□ -1.42
SKG1	YKR100C	YBR071W	P38243	211 aa		6.15	□□□□□ -1.42
SKG1	YKR100C	TMA17	Q12513	150 aa		6.15	□□□□□ -1.42
SKG1	YKR100C	SEC16	P48415	2195 aa	Known RBP	6.15	□□□□□ -1.43
SKG1	YKR100C	SAC3	P46674	1301 aa		6.15	□□□□□ -1.43
SKG1	YKR100C	AAC1	P04710	309 aa		6.14	□□□□□ -1.43
SKG1	YKR100C	ARG1	P22768	420 aa		6.14	□□□□□ -1.43
SKG1	YKR100C	HEM12	P32347	362 aa	Predicted RBP	6.14	□□□□□ -1.43
SKG1	YKR100C	FUN12	P39730	1002 aa	Known RBP	6.14	□□□□□ -1.43
SKG1	YKR100C	NOP2	P40991	618 aa	Known RBP	6.14	□□□□□ -1.43
SKG1	YKR100C	SLD3	P53135	668 aa		6.14	□□□□□ -1.43
SKG1	YKR100C	YGL039W	P53183	348 aa	Known RBP	6.14	□□□□□ -1.43
SKG1	YKR100C	SLD5	Q03406	294 aa		6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms