RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 CDK2AP1O14519 115 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 SURF6O75683 361 aaKnown RBP9.62□□□□□ -0.87
CASC19-240ENST00000641578 CASP7P55210 303 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 MTFR1Q15390 333 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 RABL6Q3YEC7 729 aaPredicted RBP9.62□□□□□ -0.87
CASC19-240ENST00000641578 HSP90AB3PQ58FF7 597 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 TTC22Q5TAA0 569 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 NLGN1Q8N2Q7 840 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 KIF1BPQ96EK5 621 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 ISCA1Q9BUE6 129 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
CASC19-240ENST00000641578 UPF2Q9HAU5 1272 aaKnown RBP9.62□□□□□ -0.87
CASC19-240ENST00000641578 CWC25Q9NXE8 425 aaPredicted RBP9.62□□□□□ -0.87
CASC19-240ENST00000641578 STAP2Q9UGK3 403 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 IQSEC3Q9UPP2 1182 aaPredicted RBP9.62□□□□□ -0.87
CASC19-240ENST00000641578 PALLDQ8WX93 1383 aa9.62□□□□□ -0.87
CASC19-240ENST00000641578 MAP3K15Q6ZN16 1313 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 SALL3Q9BXA9 1300 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 A0A087WZG4 1122 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 ERVV-1B6SEH8 477 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 VEGFAP15692 232 aaPredicted RBP9.61□□□□□ -0.87
CASC19-240ENST00000641578 SIK1P57059 783 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 TCIRG1Q13488 830 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 LENG1Q96BZ8 264 aaPredicted RBP9.61□□□□□ -0.87
CASC19-240ENST00000641578 BICC1Q9H694 974 aaKnown RBP9.61□□□□□ -0.87
CASC19-240ENST00000641578 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 RNF112Q9ULX5 631 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
CASC19-240ENST00000641578 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 PAX4O43316 350 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 SMARCA5O60264 1052 aaPredicted RBP9.6□□□□□ -0.87
CASC19-240ENST00000641578 PDE1AP54750 535 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 UBE3BQ7Z3V4 1068 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 PLPP7Q8NBV4 271 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 RHPN1Q8TCX5 695 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 SLC30A3Q99726 388 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 COPRSQ9NQ92 184 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 PRDM10Q9NQV6 1147 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
CASC19-240ENST00000641578 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 A0A0A0MRY4 1105 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 A6NJY4 79 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 CDC45O75419 566 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 GSPT1P15170 499 aaKnown RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 MX1P20591 662 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 TXKP42681 527 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 EIF5P55010 431 aaKnown RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 NRG1Q02297 640 aaPredicted RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 MCM6Q14566 821 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 INTS5Q6P9B9 1019 aaKnown RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 NPM2Q86SE8 214 aaKnown RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 OTUD7AQ8TE49 926 aaPredicted RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 IPO9Q96P70 1041 aaKnown RBP9.59□□□□□ -0.87
CASC19-240ENST00000641578 PIM2Q9P1W9 311 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 ZBTB1Q9Y2K1 713 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 ANKRD36CQ5JPF3 1778 aa9.59□□□□□ -0.87
CASC19-240ENST00000641578 USP42Q9H9J4 1324 aaKnown RBP9.58□□□□□ -0.88
CASC19-240ENST00000641578 PCCAP05165 728 aaPredicted RBP9.58□□□□□ -0.88
CASC19-240ENST00000641578 MMP10P09238 476 aa9.58□□□□□ -0.88
CASC19-240ENST00000641578 ADH7P40394 386 aa9.58□□□□□ -0.88
CASC19-240ENST00000641578 HTRA3P83110 453 aa9.58□□□□□ -0.88
CASC19-240ENST00000641578 G3BP1Q13283 466 aaKnown RBP eCLIP9.58□□□□□ -0.88
CASC19-240ENST00000641578 OS9Q13438 667 aaPredicted RBP9.58□□□□□ -0.88
CASC19-240ENST00000641578 EPHA10Q5JZY3 1008 aa9.58□□□□□ -0.88
CASC19-240ENST00000641578 PLA2G12BQ9BX93 195 aa9.58□□□□□ -0.88
CASC19-240ENST00000641578 RNF181Q9P0P0 153 aa9.58□□□□□ -0.88
CASC19-240ENST00000641578 PARP3Q9Y6F1 533 aa9.58□□□□□ -0.88
CASC19-240ENST00000641578 TTC41PQ6P2S7 1318 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 CDHR2Q9BYE9 1310 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 LY75O60449 1722 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 TUBGCP6Q96RT7 1819 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 CRKLP46109 303 aaKnown RBP9.57□□□□□ -0.88
CASC19-240ENST00000641578 RFX5P48382 616 aaPredicted RBP9.57□□□□□ -0.88
CASC19-240ENST00000641578 CTCFP49711 727 aaPredicted RBP9.57□□□□□ -0.88
CASC19-240ENST00000641578 FOXO4P98177 505 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 ITPK1Q13572 414 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 DALRD3Q5D0E6 543 aaKnown RBP9.57□□□□□ -0.88
CASC19-240ENST00000641578 CASC1Q6TDU7 716 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 BICDL1Q6ZP65 573 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 CLASRPQ8N2M8 674 aaKnown RBP9.57□□□□□ -0.88
CASC19-240ENST00000641578 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
CASC19-240ENST00000641578 TBC1D32Q96NH3 1257 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 SERTAD1Q9UHV2 236 aa9.57□□□□□ -0.88
CASC19-240ENST00000641578 CNTNAP4Q9C0A0 1308 aa9.56□□□□□ -0.88
CASC19-240ENST00000641578 A0A0G2JLW4 131 aa9.56□□□□□ -0.88
CASC19-240ENST00000641578 SDSP20132 328 aa9.56□□□□□ -0.88
CASC19-240ENST00000641578 MLLT1Q03111 559 aaPredicted RBP9.56□□□□□ -0.88
CASC19-240ENST00000641578 WASHC4Q2M389 1173 aa9.56□□□□□ -0.88
CASC19-240ENST00000641578 NLRP10Q86W26 655 aa9.56□□□□□ -0.88
CASC19-240ENST00000641578 NUP98P52948 1817 aa9.56□□□□□ -0.88
CASC19-240ENST00000641578 SASH1O94885 1247 aa9.55□□□□□ -0.88
CASC19-240ENST00000641578 TXLNAP40222 546 aa9.55□□□□□ -0.88
CASC19-240ENST00000641578 PTPN12Q05209 780 aaKnown RBP9.55□□□□□ -0.88
CASC19-240ENST00000641578 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms