RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	CLEC10A	Q8IUN9	316 aa		31.85	■■■□□ 2.69
VEGFA-231	ENST00000640499	PROCA1	Q8NCQ7	364 aa	Predicted RBP	31.85	■■■□□ 2.69
VEGFA-231	ENST00000640499	CCDC17	Q96LX7	622 aa		31.85	■■■□□ 2.69
VEGFA-231	ENST00000640499	ZFYVE28	Q9HCC9	887 aa		31.85	■■■□□ 2.69
VEGFA-231	ENST00000640499	INCENP	Q9NQS7	918 aa		31.85	■■■□□ 2.69
VEGFA-231	ENST00000640499	AGTPBP1	Q9UPW5	1226 aa		31.85	■■■□□ 2.69
VEGFA-231	ENST00000640499	CAP1	Q01518	475 aa		31.84	■■■□□ 2.69
VEGFA-231	ENST00000640499	TMEM179	Q6ZVK1	233 aa		31.84	■■■□□ 2.69
VEGFA-231	ENST00000640499	GREB1L	Q9C091	1923 aa	Predicted RBP	31.84	■■■□□ 2.69
VEGFA-231	ENST00000640499	C19orf81	C9J6K1	198 aa		31.83	■■■□□ 2.69
VEGFA-231	ENST00000640499	TLR2	O60603	784 aa		31.83	■■■□□ 2.69
VEGFA-231	ENST00000640499	PRDM1	O75626	825 aa		31.83	■■■□□ 2.69
VEGFA-231	ENST00000640499	CYP2C8	P10632	490 aa		31.83	■■■□□ 2.69
VEGFA-231	ENST00000640499	PPP4R2	Q9NY27	417 aa		31.83	■■■□□ 2.69
VEGFA-231	ENST00000640499	SLC45A1	Q9Y2W3	748 aa		31.83	■■■□□ 2.69
VEGFA-231	ENST00000640499	CTDSPL2	Q05D32	466 aa		31.82	■■■□□ 2.68
VEGFA-231	ENST00000640499	ANAPC4	Q9UJX5	808 aa		31.82	■■■□□ 2.68
VEGFA-231	ENST00000640499	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	31.81	■■■□□ 2.68	2e-6	■□□□□ 9
VEGFA-231	ENST00000640499	FKTN	O75072	461 aa		31.8	■■■□□ 2.68
VEGFA-231	ENST00000640499	C17orf99	Q6UX52	265 aa		31.8	■■■□□ 2.68
VEGFA-231	ENST00000640499	NBPF3	Q9H094	633 aa		31.8	■■■□□ 2.68
VEGFA-231	ENST00000640499	KIAA1683	Q9H0B3	1180 aa		31.8	■■■□□ 2.68
VEGFA-231	ENST00000640499	MKNK2	Q9HBH9	465 aa		31.8	■■■□□ 2.68
VEGFA-231	ENST00000640499	ZMYM6	O95789	1325 aa		31.79	■■■□□ 2.68
VEGFA-231	ENST00000640499	USP17L2	Q6R6M4	530 aa		31.79	■■■□□ 2.68
VEGFA-231	ENST00000640499	C12orf42	Q96LP6	360 aa		31.79	■■■□□ 2.68
VEGFA-231	ENST00000640499	MFAP1	P55081	439 aa	Known RBP	31.78	■■■□□ 2.68
VEGFA-231	ENST00000640499	ZYX	Q15942	572 aa	Known RBP	31.78	■■■□□ 2.68
VEGFA-231	ENST00000640499	KIAA1755	Q5JYT7	1200 aa		31.78	■■■□□ 2.68
VEGFA-231	ENST00000640499	CPA4	Q9UI42	421 aa		31.78	■■■□□ 2.68
VEGFA-231	ENST00000640499	IGKV6D-41	A0A0C4DH26	115 aa		31.77	■■■□□ 2.68
VEGFA-231	ENST00000640499	FGR	P09769	529 aa		31.77	■■■□□ 2.68
VEGFA-231	ENST00000640499	PARK7	Q99497	189 aa	Known RBP	31.77	■■■□□ 2.68
VEGFA-231	ENST00000640499	TMOD4	Q9NZQ9	345 aa		31.77	■■■□□ 2.68
VEGFA-231	ENST00000640499	HOXA7	P31268	230 aa	Predicted RBP	31.76	■■■□□ 2.67
VEGFA-231	ENST00000640499	BMP2KL	Q5H9B9	411 aa		31.76	■■■□□ 2.67
VEGFA-231	ENST00000640499	NKX2-3	Q8TAU0	364 aa		31.76	■■■□□ 2.67
VEGFA-231	ENST00000640499	EEF2	P13639	858 aa	Known RBP	31.75	■■■□□ 2.67
VEGFA-231	ENST00000640499	SP3	Q02447	781 aa		31.75	■■■□□ 2.67
VEGFA-231	ENST00000640499	ICA1	Q05084	483 aa		31.75	■■■□□ 2.67
VEGFA-231	ENST00000640499	FEZ1	Q99689	392 aa		31.75	■■■□□ 2.67
VEGFA-231	ENST00000640499	DSCC1	Q9BVC3	393 aa		31.75	■■■□□ 2.67
VEGFA-231	ENST00000640499	ASCC2	Q9H1I8	757 aa	Predicted RBP	31.75	■■■□□ 2.67
VEGFA-231	ENST00000640499	KANSL2	Q9H9L4	492 aa		31.75	■■■□□ 2.67
VEGFA-231	ENST00000640499	BCR	P11274	1271 aa		31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	HAND2	P61296	217 aa		31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	PDE4B	Q07343	736 aa		31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	FAM47A	Q5JRC9	791 aa		31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	POTEE	Q6S8J3	1075 aa		31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	ZNF444	Q8N0Y2	327 aa	Predicted RBP	31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	TMX2	Q9Y320	296 aa		31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	RAD50	Q92878	1312 aa		31.74	■■■□□ 2.67
VEGFA-231	ENST00000640499	SGSM2	O43147	1006 aa		31.73	■■■□□ 2.67
VEGFA-231	ENST00000640499	SLC3A2	P08195	630 aa	Known RBP	31.73	■■■□□ 2.67
VEGFA-231	ENST00000640499	CD99L2	Q8TCZ2	262 aa		31.73	■■■□□ 2.67
VEGFA-231	ENST00000640499	ZSWIM8	A7E2V4	1837 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	VCAM1	P19320	739 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	CTGF	P29279	349 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	USP14	P54578	494 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	PTH1R	Q03431	593 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	TBC1D10C	Q8IV04	446 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	NEDD1	Q8NHV4	660 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	ZNF287	Q9HBT7	754 aa		31.72	■■■□□ 2.67
VEGFA-231	ENST00000640499	TFAP4	Q01664	338 aa		31.71	■■■□□ 2.67
VEGFA-231	ENST00000640499	IFFO2	Q5TF58	517 aa		31.71	■■■□□ 2.67
VEGFA-231	ENST00000640499	P2RX7	Q99572	595 aa	Known RBP	31.71	■■■□□ 2.67
VEGFA-231	ENST00000640499	ARHGAP39	Q9C0H5	1083 aa		31.71	■■■□□ 2.67
VEGFA-231	ENST00000640499	PLIN4	Q96Q06	1357 aa		31.7	■■■□□ 2.67
VEGFA-231	ENST00000640499	ORC4	O43929	436 aa		31.7	■■■□□ 2.67
VEGFA-231	ENST00000640499	CTU1	Q7Z7A3	348 aa	Known RBP	31.7	■■■□□ 2.67
VEGFA-231	ENST00000640499	RUFY2	Q8WXA3	655 aa		31.7	■■■□□ 2.67
VEGFA-231	ENST00000640499	CEP95	Q96GE4	821 aa		31.7	■■■□□ 2.67
VEGFA-231	ENST00000640499	ARHGEF10L	Q9HCE6	1279 aa		31.7	■■■□□ 2.67
VEGFA-231	ENST00000640499	OSBP	P22059	807 aa		31.69	■■■□□ 2.66
VEGFA-231	ENST00000640499	PABPC4	Q13310	644 aa	Known RBP eCLIP	31.69	■■■□□ 2.66	6e-13	■■■■■ 112.3
VEGFA-231	ENST00000640499	TNS4	Q8IZW8	715 aa		31.69	■■■□□ 2.66
VEGFA-231	ENST00000640499	MCOLN1	Q9GZU1	580 aa		31.69	■■■□□ 2.66
VEGFA-231	ENST00000640499	NYAP2	Q9P242	653 aa		31.69	■■■□□ 2.66
VEGFA-231	ENST00000640499	PNMA3	Q9UL41	463 aa		31.69	■■■□□ 2.66
VEGFA-231	ENST00000640499	LAMA4	Q16363	1823 aa		31.69	■■■□□ 2.66
VEGFA-231	ENST00000640499	PEX10	O60683	326 aa		31.68	■■■□□ 2.66
VEGFA-231	ENST00000640499	LACTB	P83111	547 aa	Predicted RBP	31.68	■■■□□ 2.66
VEGFA-231	ENST00000640499	CATSPERG	Q6ZRH7	1159 aa		31.68	■■■□□ 2.66
VEGFA-231	ENST00000640499	ERO1A	Q96HE7	468 aa		31.68	■■■□□ 2.66
VEGFA-231	ENST00000640499	VCPKMT	Q9H867	229 aa		31.68	■■■□□ 2.66
VEGFA-231	ENST00000640499	IL17RB	Q9NRM6	502 aa		31.68	■■■□□ 2.66
VEGFA-231	ENST00000640499	MTMR4	Q9NYA4	1195 aa		31.68	■■■□□ 2.66
VEGFA-231	ENST00000640499	ATP2B2	Q01814	1243 aa		31.67	■■■□□ 2.66
VEGFA-231	ENST00000640499	STAG1	Q8WVM7	1258 aa		31.67	■■■□□ 2.66
VEGFA-231	ENST00000640499	NMT2	O60551	498 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	TSPY3	P0CV98	308 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	TSPY8	P0CW00	308 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	AKNAD1	Q5T1N1	836 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	OTOP1	Q7RTM1	612 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	SPICE1	Q8N0Z3	855 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	ANKRD13C	Q8N6S4	541 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	SMCR8	Q8TEV9	937 aa	Predicted RBP	31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	MKL1	Q969V6	931 aa		31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	RPAP3	Q9H6T3	665 aa	Predicted RBP	31.66	■■■□□ 2.66
VEGFA-231	ENST00000640499	RLF	Q13129	1914 aa		31.65	■■■□□ 2.66

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