RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 GPHNQ9NQX3 736 aaPredicted RBP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 SPATA31A3Q5VYP0 1347 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 MMP1P03956 469 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 NONOQ15233 471 aaKnown RBP eCLIP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 ZNF827Q17R98 1081 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 TEX11Q8IYF3 940 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 KCNB2Q92953 911 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 NAP1L4Q99733 375 aaKnown RBP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 CAPN2P17655 700 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 CAPZA3Q96KX2 299 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 GSDMAQ96QA5 445 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 MCAMP43121 646 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 GYG1P46976 350 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 FOXO4P98177 505 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 TFAP4Q01664 338 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 PICALMQ13492 652 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 UBE4AQ14139 1066 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 FMR1NBQ8N0W7 255 aaPredicted RBP9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 STAMQ92783 540 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 VPS18Q9P253 973 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 GNPATO15228 680 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 OPA1O60313 960 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 CCDC172P0C7W6 258 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 AEBP2Q6ZN18 517 aaPredicted RBP9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 MB21D2Q8IYB1 491 aaPredicted RBP9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 TRERF1Q96PN7 1200 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 ZSWIM5Q9P217 1185 aa9.65□□□□□ -0.86
HNRNPU-219ENST00000639628 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
HNRNPU-219ENST00000639628 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 SCG2P13521 617 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 EXOSC10Q01780 885 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 MICALCLQ6ZW33 695 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 BPIFA3Q9BQP9 254 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 BLZF1Q9H2G9 400 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 GOLPH3LQ9H4A5 285 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 PIH1D3Q9NQM4 214 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 TFCP2L1Q9NZI6 479 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 ZNF609O15014 1411 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 CCNT1O60563 726 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 TRAPPC10P48553 1259 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 FAM47AQ5JRC9 791 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 BLIDQ8IZY5 108 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 STRBPQ96SI9 672 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 CSRNP2Q9H175 543 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 PHLPP2Q6ZVD8 1323 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 MRPL12P52815 198 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 IFFO1Q0D2I5 559 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 STOX1Q6ZVD7 989 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 ATG9AQ7Z3C6 839 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 ENOX1Q8TC92 643 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 IQCDQ96DY2 449 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 SYMPKQ92797 1274 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 JAKMIP2Q96AA8 810 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 AIFM3Q96NN9 605 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 ISCA1Q9BUE6 129 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 SELENOOQ9BVL4 669 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 CDHR2Q9BYE9 1310 aa9.64□□□□□ -0.87
HNRNPU-219ENST00000639628 PTGDRQ13258 359 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 TRIM28Q13263 835 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 BRD3Q15059 726 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 VSTM4Q8IW00 320 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 PIGBQ92521 554 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 SLF1Q9BQI6 1058 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 DESI2Q9BSY9 194 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 SAP30BPQ9UHR5 308 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 MACROD2A1Z1Q3 448 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 KCNJ18B7U540 433 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 H7C1D1 291 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 SEMA3EO15041 775 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 MORC3Q14149 939 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 KCNJ12Q14500 433 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 GALNT17Q6IS24 598 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 CCDC65Q8IXS2 484 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 CNBD1Q8NA66 436 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 OR8K1Q8NGG5 319 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 NBPF26B4DH59 902 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 F8W031 263 aaPredicted RBP9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 SLFN14P0C7P3 912 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 LONP1P36776 959 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 PDIA6Q15084 440 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 NBPF14Q5TI25 921 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 NBPF10Q6P3W6 841 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 MAATS1Q7Z4T9 603 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 CABP7Q86V35 215 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 LCORLQ8N3X6 602 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 NBPF15Q8N660 670 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 ZC3H12CQ9C0D7 883 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 STK36Q9NRP7 1315 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 LRWD1Q9UFC0 647 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 MAN1B1Q9UKM7 699 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 VAV2P52735 878 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 RESP18Q5W5W9 173 aa9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 OSBPL5Q9H0X9 879 aaPredicted RBP9.63□□□□□ -0.87
HNRNPU-219ENST00000639628 SRPRBQ9Y5M8 271 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms