RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 CCDC17Q96LX7 622 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 EMILIN3Q9NT22 766 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 ZSWIM8A7E2V4 1837 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 PATL2C9JE40 543 aaKnown RBP26.54■■□□□ 1.84
CBWD3-212ENST00000616550 ZYXQ15942 572 aaKnown RBP26.54■■□□□ 1.84
CBWD3-212ENST00000616550 SBK1Q52WX2 424 aa26.54■■□□□ 1.84
CBWD3-212ENST00000616550 TMEM179Q6ZVK1 233 aa26.54■■□□□ 1.84
CBWD3-212ENST00000616550 TRIM47Q96LD4 638 aa26.54■■□□□ 1.84
CBWD3-212ENST00000616550 SEC62Q99442 399 aaKnown RBP26.54■■□□□ 1.84
CBWD3-212ENST00000616550 KIAA1683Q9H0B3 1180 aa26.54■■□□□ 1.84
CBWD3-212ENST00000616550 SMIM22K7EJ46 135 aa26.53■■□□□ 1.84
CBWD3-212ENST00000616550 CTGFP29279 349 aa26.53■■□□□ 1.84
CBWD3-212ENST00000616550 TDO2P48775 406 aa26.53■■□□□ 1.84
CBWD3-212ENST00000616550 ACER1Q8TDN7 264 aa26.53■■□□□ 1.84
CBWD3-212ENST00000616550 PTCH2Q9Y6C5 1203 aa26.53■■□□□ 1.84
CBWD3-212ENST00000616550 MGAMO43451 1857 aa26.53■■□□□ 1.84
CBWD3-212ENST00000616550 MINDY4BA8MYZ0 360 aa26.52■■□□□ 1.84
CBWD3-212ENST00000616550 SOX10P56693 466 aa26.52■■□□□ 1.84
CBWD3-212ENST00000616550 C12orf42Q96LP6 360 aa26.52■■□□□ 1.84
CBWD3-212ENST00000616550 NACAP1Q9BZK3 213 aa26.52■■□□□ 1.84
CBWD3-212ENST00000616550 SRRDQ9UH36 339 aa26.52■■□□□ 1.84
CBWD3-212ENST00000616550 TRIM6-TRIM34B2RNG4 842 aa26.51■■□□□ 1.83
CBWD3-212ENST00000616550 AKR1B1P15121 316 aa26.51■■□□□ 1.83
CBWD3-212ENST00000616550 FAM110CQ1W6H9 321 aa26.51■■□□□ 1.83
CBWD3-212ENST00000616550 NBPF11Q86T75 865 aa26.51■■□□□ 1.83
CBWD3-212ENST00000616550 PLEKHM2Q8IWE5 1019 aa26.51■■□□□ 1.83
CBWD3-212ENST00000616550 RGS19P49795 217 aa26.5■■□□□ 1.83
CBWD3-212ENST00000616550 SLC9C1Q4G0N8 1177 aa26.5■■□□□ 1.83
CBWD3-212ENST00000616550 TICAM2Q86XR7 235 aa26.5■■□□□ 1.83
CBWD3-212ENST00000616550 IFNL3Q8IZI9 196 aa26.5■■□□□ 1.83
CBWD3-212ENST00000616550 P2RX7Q99572 595 aaKnown RBP26.5■■□□□ 1.83
CBWD3-212ENST00000616550 EPB41L4AQ9HCS5 686 aaPredicted RBP26.5■■□□□ 1.83
CBWD3-212ENST00000616550 RILPL2Q969X0 211 aa26.49■■□□□ 1.83
CBWD3-212ENST00000616550 ARMC5Q96C12 935 aa26.49■■□□□ 1.83
CBWD3-212ENST00000616550 OSBPL3Q9H4L5 887 aa26.49■■□□□ 1.83
CBWD3-212ENST00000616550 MKNK2Q9HBH9 465 aa26.49■■□□□ 1.83
CBWD3-212ENST00000616550 MYPNQ86TC9 1320 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L15C9J2P7 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L13C9JLJ4 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L11C9JVI0 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L18D6R9N7 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L22D6RA61 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L17D6RBQ6 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L19D6RCP7 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L20D6RJB6 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 HERVK_113P62684 666 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 USP17L24Q0WX57 530 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 STK11IPQ8N1F8 1099 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 RAET1EQ8TD07 263 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 ARHGEF10LQ9HCE6 1279 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 HELLSQ9NRZ9 838 aa26.48■■□□□ 1.83
CBWD3-212ENST00000616550 TNPO2O14787 897 aaKnown RBP26.47■■□□□ 1.83
CBWD3-212ENST00000616550 ICA1Q05084 483 aa26.47■■□□□ 1.83
CBWD3-212ENST00000616550 GTF3C2Q8WUA4 911 aaPredicted RBP26.47■■□□□ 1.83
CBWD3-212ENST00000616550 NAPBQ9H115 298 aa26.47■■□□□ 1.83
CBWD3-212ENST00000616550 ZNF287Q9HBT7 754 aa26.47■■□□□ 1.83
CBWD3-212ENST00000616550 A0A1W2PRG0 241 aa26.46■■□□□ 1.83
CBWD3-212ENST00000616550 VCAM1P19320 739 aa26.46■■□□□ 1.83
CBWD3-212ENST00000616550 CCDC129Q6ZRS4 1044 aa26.46■■□□□ 1.83
CBWD3-212ENST00000616550 COA7Q96BR5 231 aa26.46■■□□□ 1.83
CBWD3-212ENST00000616550 KANSL2Q9H9L4 492 aa26.46■■□□□ 1.83
CBWD3-212ENST00000616550 PRKCZQ05513 592 aa26.45■■□□□ 1.82
CBWD3-212ENST00000616550 CATSPERGQ6ZRH7 1159 aa26.45■■□□□ 1.82
CBWD3-212ENST00000616550 SH2D4AQ9H788 454 aa26.45■■□□□ 1.82
CBWD3-212ENST00000616550 MORF4L1Q9UBU8 362 aa26.45■■□□□ 1.82
CBWD3-212ENST00000616550 ROBO3Q96MS0 1386 aa26.45■■□□□ 1.82
CBWD3-212ENST00000616550 SLC3A2P08195 630 aaKnown RBP26.44■■□□□ 1.82
CBWD3-212ENST00000616550 MLLT1Q03111 559 aaPredicted RBP26.44■■□□□ 1.82
CBWD3-212ENST00000616550 MCMDC2Q4G0Z9 681 aa26.44■■□□□ 1.82
CBWD3-212ENST00000616550 SIAH1Q8IUQ4 282 aa26.44■■□□□ 1.82
CBWD3-212ENST00000616550 ZNF444Q8N0Y2 327 aaPredicted RBP26.44■■□□□ 1.82
CBWD3-212ENST00000616550 GPRC5AQ8NFJ5 357 aa26.44■■□□□ 1.82
CBWD3-212ENST00000616550 RPAP3Q9H6T3 665 aaPredicted RBP26.44■■□□□ 1.82
CBWD3-212ENST00000616550 DOCK3Q8IZD9 2030 aa26.44■■□□□ 1.82
CBWD3-212ENST00000616550 RASA1P20936 1047 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 ATP2B2Q01814 1243 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 CLEC10AQ8IUN9 316 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 SH3TC2Q8TF17 1288 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 ZNF333Q96JL9 665 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 FAM227BQ96M60 508 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 GABRQQ9UN88 632 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 TMX2Q9Y320 296 aa26.43■■□□□ 1.82
CBWD3-212ENST00000616550 LPAR1Q92633 364 aa26.42■■□□□ 1.82
CBWD3-212ENST00000616550 TXNRD2Q9NNW7 524 aa26.42■■□□□ 1.82
CBWD3-212ENST00000616550 RBPJLQ9UBG7 517 aa26.42■■□□□ 1.82
CBWD3-212ENST00000616550 EEF2P13639 858 aaKnown RBP26.41■■□□□ 1.82
CBWD3-212ENST00000616550 GRK4P32298 578 aa26.41■■□□□ 1.82
CBWD3-212ENST00000616550 FLT3LGP49771 235 aa26.41■■□□□ 1.82
CBWD3-212ENST00000616550 PDE4BQ07343 736 aa26.41■■□□□ 1.82
CBWD3-212ENST00000616550 PPARAQ07869 468 aa26.41■■□□□ 1.82
CBWD3-212ENST00000616550 PAGR1Q9BTK6 254 aa26.41■■□□□ 1.82
CBWD3-212ENST00000616550 TMEM106CQ9BVX2 250 aa26.41■■□□□ 1.82
CBWD3-212ENST00000616550 A0A0D9SFI3 127 aa26.4■■□□□ 1.82
CBWD3-212ENST00000616550 SDSP20132 328 aa26.4■■□□□ 1.82
CBWD3-212ENST00000616550 ERVK-9P63128 1117 aa26.4■■□□□ 1.82
CBWD3-212ENST00000616550 ERVK-24P63145 666 aa26.4■■□□□ 1.82
CBWD3-212ENST00000616550 NMIQ13287 307 aaPredicted RBP26.4■■□□□ 1.82
CBWD3-212ENST00000616550 CCAR1Q8IX12 1150 aaKnown RBP26.4■■□□□ 1.82
CBWD3-212ENST00000616550 VCPKMTQ9H867 229 aa26.4■■□□□ 1.82
CBWD3-212ENST00000616550 RABGAP1Q9Y3P9 1069 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms