RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TROAPQ12815 778 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 SYT10Q6XYQ8 523 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 CCDC24Q8N4L8 307 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 ERO1AQ96HE7 468 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 CCDC34Q96HJ3 373 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 NLRP3Q96P20 1036 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 NARFQ9UHQ1 456 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 DLEC1Q9Y238 1755 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 RGL2O15211 777 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 SLU7O95391 586 aaKnown RBP19.69■□□□□ 0.74
NEK3-206ENST00000611833 TUBB4AP04350 444 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 MORC3Q14149 939 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 PTPN21Q16825 1174 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 ZNF827Q17R98 1081 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 USP49Q70CQ1 688 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 TRIML1Q8N9V2 468 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 PHF20Q9BVI0 1012 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 NFE2L3Q9Y4A8 694 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 ACTN4O43707 911 aaKnown RBP19.68■□□□□ 0.74
NEK3-206ENST00000611833 CALM1P0DP23 149 aa19.68■□□□□ 0.74
NEK3-206ENST00000611833 CALM2P0DP24 149 aa19.68■□□□□ 0.74
NEK3-206ENST00000611833 CALM3P0DP25 149 aa19.68■□□□□ 0.74
NEK3-206ENST00000611833 PCP11498 1178 aaKnown RBP19.68■□□□□ 0.74
NEK3-206ENST00000611833 EARS2Q5JPH6 523 aaKnown RBP19.68■□□□□ 0.74
NEK3-206ENST00000611833 SETDB2Q96T68 719 aa19.68■□□□□ 0.74
NEK3-206ENST00000611833 NYXQ9GZU5 481 aa19.68■□□□□ 0.74
NEK3-206ENST00000611833 BRMS1Q9HCU9 246 aa19.68■□□□□ 0.74
NEK3-206ENST00000611833 AATFQ9NY61 560 aaKnown RBP eCLIP19.68■□□□□ 0.74
NEK3-206ENST00000611833 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.68■□□□□ 0.74
NEK3-206ENST00000611833 V9GYY5 206 aaPredicted RBP19.68■□□□□ 0.74
NEK3-206ENST00000611833 PRDX5P30044 214 aa19.68■□□□□ 0.74
NEK3-206ENST00000611833 HIBADHP31937 336 aaKnown RBP19.68■□□□□ 0.74
NEK3-206ENST00000611833 NBPF5PQ86XG9 351 aaPredicted RBP19.68■□□□□ 0.74
NEK3-206ENST00000611833 ENOX1Q8TC92 643 aaKnown RBP19.68■□□□□ 0.74
NEK3-206ENST00000611833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.68■□□□□ 0.74
NEK3-206ENST00000611833 FMR1Q06787 632 aaKnown RBP eCLIP19.67■□□□□ 0.74
NEK3-206ENST00000611833 GOLGA8FQ08AF8 430 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 GOLGA8DPQ0D2H9 430 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 COL24A1Q17RW2 1714 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 DHX58Q96C10 678 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 FEZ1Q99689 392 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 DCP1AQ9NPI6 582 aaPredicted RBP19.67■□□□□ 0.74
NEK3-206ENST00000611833 PRDM10Q9NQV6 1147 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
NEK3-206ENST00000611833 RPS6KA4O75676 772 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 PIP4K2BP78356 416 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 TRMT44Q8IYL2 757 aaKnown RBP19.67■□□□□ 0.74
NEK3-206ENST00000611833 TMX1Q9H3N1 280 aa19.67■□□□□ 0.74
NEK3-206ENST00000611833 NMT2O60551 498 aa19.66■□□□□ 0.74
NEK3-206ENST00000611833 INTS13Q9NVM9 706 aa19.66■□□□□ 0.74
NEK3-206ENST00000611833 DDAH1O94760 285 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 RC3H1Q5TC82 1133 aaKnown RBP19.65■□□□□ 0.74
NEK3-206ENST00000611833 TXNRD3Q86VQ6 643 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 EPSTI1Q96J88 318 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 ANKRD2Q9GZV1 360 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 LAMB1P07942 1786 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 GNPATO15228 680 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 BMP15O95972 392 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 TMTC3Q6ZXV5 915 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 AMIGO3Q86WK7 504 aa19.65■□□□□ 0.74
NEK3-206ENST00000611833 CRNKL1Q9BZJ0 848 aaKnown RBP19.65■□□□□ 0.74
NEK3-206ENST00000611833 WNT7AO00755 349 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 ORC4O43929 436 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 ZPR1O75312 459 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 ZNF18P17022 549 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 AFMP43652 599 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 NPY5RQ15761 445 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 FAM47AQ5JRC9 791 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 CTCFLQ8NI51 663 aaPredicted RBP19.64■□□□□ 0.74
NEK3-206ENST00000611833 JAG2Q9Y219 1238 aa19.64■□□□□ 0.74
NEK3-206ENST00000611833 CYP2D6P10635 497 aa19.64■□□□□ 0.73
NEK3-206ENST00000611833 PLCD1P51178 756 aa19.64■□□□□ 0.73
NEK3-206ENST00000611833 ETF1P62495 437 aaKnown RBP19.64■□□□□ 0.73
NEK3-206ENST00000611833 ZNF174Q15697 407 aa19.64■□□□□ 0.73
NEK3-206ENST00000611833 ELF2Q15723 593 aa19.64■□□□□ 0.73
NEK3-206ENST00000611833 FERMT2Q96AC1 680 aa19.64■□□□□ 0.73
NEK3-206ENST00000611833 L2HGDHQ9H9P8 463 aa19.64■□□□□ 0.73
NEK3-206ENST00000611833 MORC2Q9Y6X9 1032 aaPredicted RBP19.64■□□□□ 0.73
NEK3-206ENST00000611833 CNTNAP5Q8WYK1 1306 aa19.64■□□□□ 0.73
NEK3-206ENST00000611833 KIAA1551Q9HCM1 1747 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 ZSCAN12O43309 604 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 TM4SF1P30408 202 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 VPS72Q15906 364 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 NOM1Q5C9Z4 860 aaKnown RBP19.63■□□□□ 0.73
NEK3-206ENST00000611833 SPECC1LQ69YQ0 1117 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 TPTE2Q6XPS3 522 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 SRBD1Q8N5C6 995 aaKnown RBP19.63■□□□□ 0.73
NEK3-206ENST00000611833 ZNF397Q8NF99 534 aaPredicted RBP19.63■□□□□ 0.73
NEK3-206ENST00000611833 SPATA20Q8TB22 786 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 SYMPKQ92797 1274 aaKnown RBP19.63■□□□□ 0.73
NEK3-206ENST00000611833 C8orf37Q96NL8 207 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 ATP8A2Q9NTI2 1148 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 DNAI1Q9UI46 699 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 BTAF1O14981 1849 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 A0A087X0B3 334 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 ARHGAP6O43182 974 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 SLFN14P0C7P3 912 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 ERCC5P28715 1186 aaPredicted RBP19.63■□□□□ 0.73
NEK3-206ENST00000611833 FCHSD1Q86WN1 690 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 TNFRSF25Q93038 417 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms