RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 NOSTRINQ8IVI9 506 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 MAP7D3Q8IWC1 876 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 FER1L4A9Z1Z3 1794 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 S100BP04271 92 aaPredicted RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 AFMP43652 599 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 CCDC30Q5VVM6 783 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 LRGUKQ96M69 825 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 DDX28Q9NUL7 540 aaKnown RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 KIAA0100Q14667 2235 aaKnown RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 CABS1Q96KC9 395 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 YY1AP1Q9H869 796 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 CYLC1P35663 651 aaPredicted RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 STAT6P42226 847 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 ZBTB21Q9ULJ3 1066 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 FAN1Q9Y2M0 1017 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 TSPY2A6NKD2 308 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 TSPY3P0CV98 308 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 TSPY8P0CW00 308 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 TSPY1Q01534 308 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 ZNF569Q5MCW4 686 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 RCSD1Q6JBY9 416 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 GSDMAQ96QA5 445 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 SH2D4AQ9H788 454 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 THEGQ9P2T0 379 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 SLC4A7Q9Y6M7 1214 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 U3KPZ7 1027 aaPredicted RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 CITO14578 2027 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 FAM170AA1A519 330 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 SLC9A1P19634 815 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.52□□□□□ -1.694e-11■■■■■ 96.3
KCNMA1-223ENST00000604624 DRC3Q9H069 523 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 HAUS2Q9NVX0 235 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 GINS2Q9Y248 185 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 CEP152O94986 1710 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 KNDC1Q76NI1 1749 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 GNAI2P04899 355 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 STX1BP61266 288 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 STX1AQ16623 288 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 SEL1L2Q5TEA6 688 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 MYSM1Q5VVJ2 828 aa4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 ZNF444Q8N0Y2 327 aaPredicted RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 DDX54Q8TDD1 881 aaKnown RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 ZMYND8Q9ULU4 1186 aaPredicted RBP4.52□□□□□ -1.69
KCNMA1-223ENST00000604624 POLE2P56282 527 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SP4Q02446 784 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 UNC45BQ8IWX7 931 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 MYCBPQ99417 103 aaPredicted RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 TRIM56Q9BRZ2 755 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 RIPOR2Q9Y4F9 1068 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 CCT2P78371 535 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 CCDC15Q0P6D6 951 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SLC44A4Q53GD3 710 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ARHGEF1Q92888 912 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 NDEL1Q9GZM8 345 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SUCLA2Q9P2R7 463 aaPredicted RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 CTNNA3Q9UI47 895 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 LZTS1Q9Y250 596 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 PREX1Q8TCU6 1659 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ALKQ9UM73 1620 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ST13P50502 369 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 CUL3Q13618 768 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ABCF3Q9NUQ8 709 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 BIN2Q9UBW5 565 aaPredicted RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 MYBBP1AQ9BQG0 1328 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SYCE1LA8MT33 242 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 EFCAB14O75071 495 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 DCAF17Q5H9S7 520 aaPredicted RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 PHLDB3Q6NSJ2 640 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 CERS3Q8IU89 383 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 CNGB3Q9NQW8 809 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 TLK1Q9UKI8 766 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ZNF165P49910 485 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 RAPGEF1Q13905 1077 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SCAND2PQ9GZW5 306 aaPredicted RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 PHAXQ9H814 394 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 PANK3Q9H999 370 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SLC38A10Q9HBR0 1119 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 NVLO15381 856 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SNX1Q13596 522 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 HHATQ5VTY9 493 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 CTAGE3PQ8IX95 158 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 TMCO5AQ8N6Q1 288 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 NECAB1Q8N987 351 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 OTULINQ96BN8 352 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 KIF9Q9HAQ2 790 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 STX8Q9UNK0 236 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 TTC4O95801 387 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 TBL3Q12788 808 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 MRPL28Q13084 256 aaKnown RBP4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 HDXQ7Z353 690 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ADCK1Q86TW2 530 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 SCYL3Q8IZE3 742 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 LMBR1Q8WVP7 490 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 GDPD2Q9HCC8 539 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ARHGEF3Q9NR81 526 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 hCG_2014768A0A024R1R8 64 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 NBPF26B4DH59 902 aa4.51□□□□□ -1.69
KCNMA1-223ENST00000604624 ACTN4O43707 911 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms