RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ABCB5Q2M3G0 1257 aa21.86■■□□□ 1.09
CHMP2A-208ENST00000601220 SLC9C2Q5TAH2 1124 aa21.86■■□□□ 1.09
CHMP2A-208ENST00000601220 GPR142Q7Z601 462 aa21.86■■□□□ 1.09
CHMP2A-208ENST00000601220 NECAB2Q7Z6G3 386 aa21.86■■□□□ 1.09
CHMP2A-208ENST00000601220 SOCS4Q8WXH5 440 aa21.86■■□□□ 1.09
CHMP2A-208ENST00000601220 KIF1BPQ96EK5 621 aa21.86■■□□□ 1.09
CHMP2A-208ENST00000601220 OGDHLQ9ULD0 1010 aa21.86■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L15C9J2P7 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L13C9JLJ4 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L11C9JVI0 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L18D6R9N7 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L22D6RA61 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L17D6RBQ6 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L19D6RCP7 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L20D6RJB6 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 USP17L24Q0WX57 530 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 RAB3GAP1Q15042 981 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 ZYXQ15942 572 aaKnown RBP21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 CLASRPQ8N2M8 674 aaKnown RBP21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 PAGR1Q9BTK6 254 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 RABGAP1Q9Y3P9 1069 aa21.85■■□□□ 1.09
CHMP2A-208ENST00000601220 ZNF532Q9HCE3 1301 aa21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 MS4A1P11836 297 aa21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 PRKAR2AP13861 404 aaKnown RBP21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 VCAM1P19320 739 aa21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 USP14P54578 494 aa21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 CACNB2Q08289 660 aaPredicted RBP21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 LBX2Q6XYB7 198 aa21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 PLEKHH3Q7Z736 793 aa21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 COG6Q9Y2V7 657 aa21.84■■□□□ 1.09
CHMP2A-208ENST00000601220 MYH1P12882 1939 aa21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 GOLIM4O00461 696 aa21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 CCL14Q16627 93 aa21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 TRMT44Q8IYL2 757 aaKnown RBP21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 LCORLQ8N3X6 602 aa21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 EDC3Q96F86 508 aaKnown RBP21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 FEZ1Q99689 392 aa21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.09
CHMP2A-208ENST00000601220 DDX60LQ5H9U9 1706 aaKnown RBP21.83■■□□□ 1.08
CHMP2A-208ENST00000601220 APBB1O00213 710 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 POLR3DP05423 398 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 RGS2P41220 211 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 PDE3AQ14432 1141 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 SEPT2Q15019 361 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 LHX8Q68G74 356 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 CRNKL1Q9BZJ0 848 aaKnown RBP21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 NBPF3Q9H094 633 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 CABP5Q9NP86 173 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 DCP1AQ9NPI6 582 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 MCM9Q9NXL9 1143 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 BTBD7Q9P203 1132 aa21.82■■□□□ 1.08
CHMP2A-208ENST00000601220 A0A1W2PRG0 241 aa21.81■■□□□ 1.08
CHMP2A-208ENST00000601220 RAB11FIP3O75154 756 aa21.81■■□□□ 1.08
CHMP2A-208ENST00000601220 IFIT2P09913 472 aaKnown RBP21.81■■□□□ 1.08
CHMP2A-208ENST00000601220 ZKSCAN1P17029 563 aaPredicted RBP21.81■■□□□ 1.08
CHMP2A-208ENST00000601220 SLFNL1Q499Z3 407 aa21.81■■□□□ 1.08
CHMP2A-208ENST00000601220 SDR42E1Q8WUS8 393 aa21.81■■□□□ 1.08
CHMP2A-208ENST00000601220 DNAJC2Q99543 621 aaKnown RBP21.81■■□□□ 1.08
CHMP2A-208ENST00000601220 SPDYE16A6NNV3 312 aaPredicted RBP21.8■■□□□ 1.08
CHMP2A-208ENST00000601220 HMMRO75330 724 aa21.8■■□□□ 1.08
CHMP2A-208ENST00000601220 CYP2D6P10635 497 aa21.8■■□□□ 1.08
CHMP2A-208ENST00000601220 CCND3P30281 292 aaPredicted RBP21.8■■□□□ 1.08
CHMP2A-208ENST00000601220 MAP2K5Q13163 448 aa21.8■■□□□ 1.08
CHMP2A-208ENST00000601220 APBA2Q99767 749 aa21.8■■□□□ 1.08
CHMP2A-208ENST00000601220 STAP2Q9UGK3 403 aa21.8■■□□□ 1.08
CHMP2A-208ENST00000601220 A0A1W2PPC1 479 aa21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 IGHA2P01877 340 aa21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 COL6A1P12109 1028 aa21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 SIAH1Q8IUQ4 282 aa21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 C11orf49Q9H6J7 331 aa21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 RPAP3Q9H6T3 665 aaPredicted RBP21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 FLRT1Q9NZU1 646 aa21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 PFASO15067 1338 aa21.79■■□□□ 1.08
CHMP2A-208ENST00000601220 PRKAB2O43741 272 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 CHGBP05060 677 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 ATP5JP18859 108 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 PTPREP23469 700 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 ADD2P35612 726 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 CCNA1P78396 465 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 KIAA1755Q5JYT7 1200 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 CCAR1Q8IX12 1150 aaKnown RBP21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 SLC44A5Q8NCS7 719 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 GDF15Q99988 308 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 BOLA2Q9H3K6 86 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 ARMT1Q9H993 441 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 PAG1Q9NWQ8 432 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 ALPK3Q96L96 1907 aa21.78■■□□□ 1.08
CHMP2A-208ENST00000601220 SLC15A5A6NIM6 579 aa21.77■■□□□ 1.08
CHMP2A-208ENST00000601220 SMIM22K7EJ46 135 aa21.77■■□□□ 1.08
CHMP2A-208ENST00000601220 HOXC6P09630 235 aa21.77■■□□□ 1.08
CHMP2A-208ENST00000601220 C7orf61Q8IZ16 206 aa21.77■■□□□ 1.08
CHMP2A-208ENST00000601220 DYNLL2Q96FJ2 89 aa21.77■■□□□ 1.08
CHMP2A-208ENST00000601220 HAUS7Q99871 368 aa21.77■■□□□ 1.08
CHMP2A-208ENST00000601220 SOX1O00570 391 aaPredicted RBP21.76■■□□□ 1.07
CHMP2A-208ENST00000601220 BMP8BP34820 402 aa21.76■■□□□ 1.07
CHMP2A-208ENST00000601220 GRB14Q14449 540 aa21.76■■□□□ 1.07
CHMP2A-208ENST00000601220 ATP8A2Q9NTI2 1148 aa21.75■■□□□ 1.07
CHMP2A-208ENST00000601220 SWAP70Q9UH65 585 aa21.75■■□□□ 1.07
CHMP2A-208ENST00000601220 ZMYND8Q9ULU4 1186 aaPredicted RBP21.75■■□□□ 1.07
CHMP2A-208ENST00000601220 LAMA3Q16787 3333 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms